Gene Information

Name : Ent638_1114 (Ent638_1114)
Accession : YP_001175846.1
Strain : Enterobacter sp. 638
Genome accession: NC_009436
Putative virulence/resistance : Virulence
Product : ABC-3 protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 1222185 - 1223024 bp
Length : 840 bp
Strand : +
Note : PFAM: ABC-3 protein; KEGG: ecv:APECO1_271 ABC Mn+2/Fe+2 transporter, inner membrane subunit SitD

DNA sequence : 
ATGATCGCGCTACTGCTCGAACCCTTCCAGTTCGCTTTTATGAATAATGCGATGCTGATTTCACTGATGGTCGCCGTGCC
CTGCGCGCTGCTGTCGGTCTTTTTGGTCCTGAAGGGCTGGGCGCTGATGGGCGATGCAATGAGTCATGCGGTCTTTCCGG
GCGTGGTGCTGGCCTGGATGCTCGGCCTGCCGCTGGCGTTAGGCGCGTTCGTGGCGGGATTATTCTGCGCCGTCGCCACG
GGATACCTGAAAGATAACAGCCGTATCAAGCAAGATACCGTCATGGGCATCGTGTTTTCCGGCATGTTCGCCGCAGGGTT
GATTCTCTATATCGCCGTTAAGCCGGAAGTGCATCTCGACCATATTCTGTTTGGCGATATGCTGGGGATTAACGCGATGG
ATATCGCCCAGAGCGGGATCGTGGCGGCGCTGATTACGCTGGTCATTGGCCTTAAATGGCGCGATTTCCTGCTGTTCTGC
TTTGACTATCAGCAGGCGCAGGTGAGCGGTTTACGCACCCGGTGGCTGCACTATGGCCTGCTGTGCATGGTCTCGCTCAC
TATCGTGGCGACGCTAAAAGCGGTGGGGATTATTCTGTCGATTTCGCTGCTGATAGCCCCTGGGGCGATAGCGGTGCTGG
TAACGACGCGCTTCCACGTCGCGCTGCTGGTGGCGGTGGTGATATCCATGCTGGTGTGCGTCAGCGGCGTATACCTATCG
TTTTACCTCGACAGCGCGCCTGCGCCGACCATCGTAGTGCTGTTTGCGCTGGTGTTTATCATCACTTTTGCCGTGACCAG
CGTGAACGCTAAGCGGCGGGAAAATATGACAGCAGGGTAA

Protein sequence : 
MIALLLEPFQFAFMNNAMLISLMVAVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWMLGLPLALGAFVAGLFCAVAT
GYLKDNSRIKQDTVMGIVFSGMFAAGLILYIAVKPEVHLDHILFGDMLGINAMDIAQSGIVAALITLVIGLKWRDFLLFC
FDYQQAQVSGLRTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLVTTRFHVALLVAVVISMLVCVSGVYLS
FYLDSAPAPTIVVLFALVFIITFAVTSVNAKRRENMTAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-89 70
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-89 70
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-89 70
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-89 70
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-89 70
sitC NP_461784.1 permease Virulence SPI-1 Protein 2e-45 41
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-45 41
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-45 41
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-45 41
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-45 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ent638_1114 YP_001175846.1 ABC-3 protein BAC0352 Protein 7e-90 70
Ent638_1114 YP_001175846.1 ABC-3 protein BAC0442 Protein 6e-70 52
Ent638_1114 YP_001175846.1 ABC-3 protein BAC0351 Protein 9e-46 41
Ent638_1114 YP_001175846.1 ABC-3 protein BAC0441 Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ent638_1114 YP_001175846.1 ABC-3 protein VFG0528 Protein 6e-90 70
Ent638_1114 YP_001175846.1 ABC-3 protein VFG0527 Protein 8e-46 41