Gene Information

Name : ribD (PST_0835)
Accession : YP_001171374.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 929138 - 930217 bp
Length : 1080 bp
Strand : +
Note : Code: H; COG: COG1985

DNA sequence :
ATGGCCCGGGCGCTGCAGTTGGCGCGCAAAGGGCTTTATTCGACCCATCCGAACCCGCGGGTCGGTTGCGTCATCGTCGC
CGATGGCGAACTGGTCGGCGAAGGCTGGCACGTACGCGCCGGCGAGCCGCATGCCGAAGTCCATGCGCTGCGCCAGGCGG
GTGAGCGCGCCCGCGGTGCCACCGCCTACGTCACCCTCGAACCCTGCAGCCATTACGGGCGCACGCCGCCCTGTGCCGAA
GCGCTGGTCAAGGCGGGGGTCGGGCGCGTGGTGGCGGCCATGCAGGACCCCAATCCGCAGGTCGCCGGGAACGGTCTGGA
GCGGCTGCGCAGCGCCGGTATCGAAGTTGCCAGCGGCGTACTGGAAGGCGAGGCGCGGGAACTCAATGCGGGCTTTATCA
AGCGCATGGAAAGCGGCCTGCCATACGTGCGCGCCAAGCTGGCCATGAGCCTGGACGGGCGCACCGCGATGGCCAGCGGC
GAGAGCCAGTGGATCACCGGCCCGGCGGCGCGTGCCGAGGTGCAGCGCCTGCGCGCCCGCTCCAGCGTGGTGCTGACCGG
CGCCGACACCGTGCTGATGGATGCCGCGCGGCTGACCGTACGCGGCGCCGAACTGGGGCTGGATGCGGAAACGACCGCGC
TAGCGCTGCAGCGCCCGCCGCTGCGGGTGCTGGTCGATGGTCGGCTGCGCGTGCCGCTGGATGCGCCGTTCTTTCAGGCC
GGTCCGGCGCTGGTCGTCACGGTGGTCGCCGGCTGCGAGGAGACCTATCGTCGCGCCGGCCACGAGGCGCTGGTGCTGGG
GCAGGAGCGGGTCGACCTGACCTCGCTGCTGCGCGAGCTGGCTGCCCGTGGTGCCAACGAGGTGCTGGTCGAGGCCGGAC
CGCGGCTGGTCAGTGCGTTCGCCAGCCTCGGCCTGATCGACGAGTACCAGCTGTTCATGGCGGCCAAGTTTCTCGGCTCC
TCGGCGCGGCCGCTGCTGGAGCTTCCGCTCGAGCGCATGAGCGAGGCGCGCGAGTTGAAGATCGTCGACATCCGGGCGGT
GGGCGACGACTGGAAGATCCTGGCGCGCCCGGCCAACTGA

Protein sequence :
MARALQLARKGLYSTHPNPRVGCVIVADGELVGEGWHVRAGEPHAEVHALRQAGERARGATAYVTLEPCSHYGRTPPCAE
ALVKAGVGRVVAAMQDPNPQVAGNGLERLRSAGIEVASGVLEGEARELNAGFIKRMESGLPYVRAKLAMSLDGRTAMASG
ESQWITGPAARAEVQRLRARSSVVLTGADTVLMDAARLTVRGAELGLDAETTALALQRPPLRVLVDGRLRVPLDAPFFQA
GPALVVTVVAGCEETYRRAGHEALVLGQERVDLTSLLRELAARGANEVLVEAGPRLVSAFASLGLIDEYQLFMAAKFLGS
SARPLLELPLERMSEARELKIVDIRAVGDDWKILARPAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-68 52
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-68 52