Gene Information

Name : PST_0698 (PST_0698)
Accession : YP_001171246.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Unknown
Product : IS3 orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 805277 - 805927 bp
Length : 651 bp
Strand : +
Note : Code: L; COG: COG2801

DNA sequence :
ATGAGGACACATGCCCCAGCGTTTTCGGTGAAAGCCATGTGCCGTGTTCTGGGTGTCGCCCGCAGTGGTTTCTACGCCTG
GTGCTCACGCGAGCCATCCACGCGCCGCCAGCAACGGGCCGAGCTGGATCAGCGGGTCGCGCAAGCGTATAACGCCCGTA
AGGGCCGCAGTGGCGCCCCGCGGCTGTGCCATGACCTGTGGGAAGCCGGGCTGCGCTGTAATCGCAAGACGGTTGCAGCC
TCGATGCAGCGACAAGGCTTACGCGCCAAGGCGGCCAAGAAGTTCAAGGCCACAACCAACTCCCGACACTCGCTCCCGGT
GGCAGAGAACTTGCTCAAGCAAGACTTCACAGCATCAGCACCCAATCAGAAATGGGTGGGCGACATCACCTACCTGCACA
CGGACGAGGGCTGGCTGTATCTCGCCGTAATCATTGATCTGTACTCGCGCATGGTGGTCGGCTGGGCCATGAGCGAACGC
TTGACGGCTGACCTGGCCTGCGATGCTCTGCACATGGCGCTGTGGCGGCGAAAGCAGCCAAAGGGAGTGATCGTACACAG
CGACCGCGGCAGTCAGTACTGCTCAACGGCTTATCAGGGTCTAATCCGCGCTCATCAGCTGCGATGCAGTATGAGCGCGA
AAGGCAACTGA

Protein sequence :
MRTHAPAFSVKAMCRVLGVARSGFYAWCSREPSTRRQQRAELDQRVAQAYNARKGRSGAPRLCHDLWEAGLRCNRKTVAA
SMQRQGLRAKAAKKFKATTNSRHSLPVAENLLKQDFTASAPNQKWVGDITYLHTDEGWLYLAVIIDLYSRMVVGWAMSER
LTADLACDALHMALWRRKQPKGVIVHSDRGSQYCSTAYQGLIRAHQLRCSMSAKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-56 63
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-55 63
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 5e-56 63
tra5_2 AAC28569.1 transposase Tra5 Not tested LEE Protein 3e-40 62
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 6e-52 61
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 7e-35 50
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-35 50
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-35 50
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 8e-38 49
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-37 49
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-38 49
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 9e-38 49
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-38 49
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-38 49
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-37 49
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-37 49
unnamed AAF09022.1 unknown Not tested SHI-O Protein 6e-38 48
unnamed CAC39293.1 hypothetical protein Not tested LPA Protein 4e-30 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_0698 YP_001171246.1 IS3 orfB VFG1631 Protein 3e-52 61
PST_0698 YP_001171246.1 IS3 orfB VFG1706 Protein 3e-38 49