Gene Information

Name : PST_0580 (PST_0580)
Accession : YP_001171128.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Unknown
Product : ISPsy14, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 649875 - 651389 bp
Length : 1515 bp
Strand : +
Note : Code: L; COG: COG4584

DNA sequence :
ATGCGTAAAATCCGAGAGGTGTTGCGCCTCAAGTTCGACTGCGGCCTGTCCGTGCGCAAGATCGCCCGCAGCCTGGGTAC
TGGCCACAGCAGTGCCGGTGATTACCTCTGTCGTTTTGCCGCCAGCGGTCTCAGTTGGCCCTGTTCGTTGTCCGATGCCG
AATTGGAGCAGCAACTGTTCCCGCCGGCCCCGGCGGTTGCCAGTGAGAAGCGGCCTTTACCCGATTGGGCATGGGTGCAT
GCCGAACTGCGCCGCCCCGGGGTGACCCTGGCGCTGCTCTGGCAGGAGTACCGCCTGAGCCAGCCGCAGGGCTTTCAGTA
CAGCTGGTTCTGTGAGCACTACCGGGCCTGGCAGGGCAAGCTGGACGTGGTGATGCGTCAGGAGCACCGCGTCGGCGAGA
AGCTGTTCGTCGACTATGCCGGCCAGACGGTGCCGGTTATCGACCGCCACAGCGGCGAGATCCGCCAGGCGCAGGTGTTC
GTCGCGGTGCTTGGCGCGTCCAGCTACACCTTCGCCGAAGCCACCTGGTCGCAGCAGCTGCCGGACTGGCTAGGCTCGCA
TACCCGTTGCTTCGCCTTCCTCGGCGGCGTGCCGGAGATCGTGGTGCCGGACAACCTGCGCAGCGCGGTGAGCAAGGCCC
ATCGTTACGAGCCGGACATCAACCCCAGCTACCGCGACCTTGCCGAGCACTACGGAGTGGCGGTGGTGCCGGCGCGGGCG
CGTAAGCCGCGCGACAAAGCCAAGGCCGAAGTCGGCGTGCAGGTGGTCGAGCGTTGGATCCTCGCCGCCCTGCGCAACCG
CCAGTTCTTCTCCCTGGATGAACTCAACAGCGCTATCGCCGGGCTGCTGGAGCGGCTCAATCGCCGCCCGTTTCGCAGGT
TACCGGGCTCCCGGCACTCGGCCTTCGAGGCTCTGGATCGTCCGGCGCTGCGCCCATTACCGGAGCAACCCTACGTCTAT
GCCGAGTGGAAGAAGGCGCGGGTGCACATCGACTACCACGTCGAGGTCGATGGGCATTACTACTCGGTGCCGTATCAACT
GGTGAAGAAGCAGCTGGAGGTGCGCCTGACGGCGCGCACCGTCGAGTGTTTCCACGCCAATCAGCGGGGGGCTAGCCACC
TGCGCTCAATGCACAAGGGCAGGCACAGCACGCAGGCCGAGCACATGCCCAAGAGCCATCGCGAGCATGCCGAGTGGACG
CCGCAACGGCTGATCCGCTGGGCCGAGCAGACCGGGCCGAGCACCGCCGGCGTGATCCGGCACATCCTCGAACGGCGCAT
CCATCCGCAGCAGGGCTACCGGGCCTGCCTGGGCATCCTGCGCCTGGGCAAGACCCATGGCGAAGTGCGCTTGGAGTTGG
CCTGCCGTCGCGCCATCAGCCTCGGTGCGTGCAGTTACAAGAGCCTCGAATCGATCCTGCGCCAGGGGCTGGAAAACCTG
CCGCTGGCCCAGCAGCACCTGCCCCTGCTGCCGGACGACCACGCCAACCTGCGCGGCCCCGGCTACTACCACTGA

Protein sequence :
MRKIREVLRLKFDCGLSVRKIARSLGTGHSSAGDYLCRFAASGLSWPCSLSDAELEQQLFPPAPAVASEKRPLPDWAWVH
AELRRPGVTLALLWQEYRLSQPQGFQYSWFCEHYRAWQGKLDVVMRQEHRVGEKLFVDYAGQTVPVIDRHSGEIRQAQVF
VAVLGASSYTFAEATWSQQLPDWLGSHTRCFAFLGGVPEIVVPDNLRSAVSKAHRYEPDINPSYRDLAEHYGVAVVPARA
RKPRDKAKAEVGVQVVERWILAALRNRQFFSLDELNSAIAGLLERLNRRPFRRLPGSRHSAFEALDRPALRPLPEQPYVY
AEWKKARVHIDYHVEVDGHYYSVPYQLVKKQLEVRLTARTVECFHANQRGASHLRSMHKGRHSTQAEHMPKSHREHAEWT
PQRLIRWAEQTGPSTAGVIRHILERRIHPQQGYRACLGILRLGKTHGEVRLELACRRAISLGACSYKSLESILRQGLENL
PLAQQHLPLLPDDHANLRGPGYYH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 4e-109 53
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 3e-109 53
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 5e-109 52
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 3e-103 47