Gene Information

Name : algR (PST_0523)
Accession : YP_001171071.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : alginate biosynthesis regulatory protein AlgR
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 580664 - 581458 bp
Length : 795 bp
Strand : +
Note : Code: KT; COG: COG3279

DNA sequence : 
ATGTCTACGCTATCCGTGTGCGAGACAACCGCAGGAAGCCAGATCTATATGAATGTCCTGATTGTCGATGACGAACCTCT
AGCCCGCGAGCGCCTGAGCCGACTGGTAGGTGACCTCGACGGCTATCGTGTCCTCGAGCCTGCCGCCAGCAATGGCGAAG
AAGCACTGACGCTGATCGAGGAACTGCGCCCTGATATCGTGCTGCTGGATATCCGCATGCCCGGGCTCGATGGCCTGCAG
GTCGCAGCCAGGCTCTGCGAGACGGATGCGCCGCCGGCGGTGATCTTTTGTACTGCCCATGATGAATTCGCCCTGGAGGC
GTTCCAGGTCAGCGCGGTTGGCTACCTGGTCAAGCCGGTGCGCCCGGAGCATCTGTCGGAGGCGCTGAAGAAGGCCGAGC
GGCCCAACCGCATGCAGCTGGCGGCGCTGACCCGACCGGCCGCCGTTTCCGGTGCCGGGCCGCGCAGCCACATCAGCGCA
CGTACCCGCAAGGGCATCGAGCTGATTCCGCTGGATCAGGTGATCTACTTCATCGCCGACCACAAGTACGTCACCCTGCG
CCATGTCGGCGGTGAGGTGCTGCTGGACGAGCCGCTCAAATCCCTGGAAGACGAGTTCGGTGAACGCTTCGTGCGCATCC
ATCGCAACGCGCTGGTGTTCCGCGATCGGATCGAGCGTCTGCAGCGCACGCCGCTCGGGCACTTCCAGCTGTTCCTCAAG
GGACTCGATGGCGAGGCGTTGACTGTGAGTCGGCGTCACGTGGCCGGTGTGCGCAAACTGATGCAGAATCTCTGA

Protein sequence : 
MSTLSVCETTAGSQIYMNVLIVDDEPLARERLSRLVGDLDGYRVLEPAASNGEEALTLIEELRPDIVLLDIRMPGLDGLQ
VAARLCETDAPPAVIFCTAHDEFALEAFQVSAVGYLVKPVRPEHLSEALKKAERPNRMQLAALTRPAAVSGAGPRSHISA
RTRKGIELIPLDQVIYFIADHKYVTLRHVGGEVLLDEPLKSLEDEFGERFVRIHRNALVFRDRIERLQRTPLGHFQLFLK
GLDGEALTVSRRHVAGVRKLMQNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 2e-51 46
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 2e-51 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
algR YP_001171071.1 alginate biosynthesis regulatory protein AlgR VFG0119 Protein 1e-106 88