Gene Information

Name : rph (PST_0463)
Accession : YP_001171011.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 518449 - 519171 bp
Length : 723 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAAGCGACCCAGTGGCCGTGCCGCCGACCAGCTGCGCTCGATCCGCATCACCCGCAACTACACCAAGCATGCCGAAGG
CTCGGTGCTGGTGGAGTTCGGTGATACCAAGGTGATCTGCACAGCCAGCATCGAGACAGGCGTACCGCGCTTCCTCAAGG
GGCAGGGTCAGGGCTGGCTGACCGCCGAATACGGCATGCTGCCGCGCGCCACGGGTGAGCGTAACCAGCGCGAAGCGGCG
CGGGGCAAGCAGGGCGGGCGTACCCTGGAAATCCAGCGTCTGATCGGCCGTTCGCTGCGGGCCGCGCTGGACATGAGCAA
GCTCGGCGAGAACACCCTGTACATCGACTGCGACGTGATCCAGGCAGACGGTGGTACGCGCACCGCCTCGATCACCGGCG
CCATGGTGGCCGTGATCGACGCCCTGAAGGTGCTGAAGAAGCGCGGCGGTCTGAAGGGCGGCGATCCGGTCAAGCAGATG
ATTGCCGCCGTATCGGTCGGCATCTATCAGGGCGAGCCGGTGCTCGATCTGGACTATCTGGAAGACTCGGCTGCCGAAAC
CGATCTGAACGTCGTGATGACCGACGCCGGTGGCTTCATCGAGGTTCAGGGCACGGCCGAGGGCGCGCCGTTCCATGCCG
ACGAGCTCAACGCCATGCTGGCGCTGGCCCACGATGGTGTGCGTCAGCTGTTCGAACTGCAGCGCGCGGCGCTGGCGGAC
TGA

Protein sequence :
MKRPSGRAADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTASIETGVPRFLKGQGQGWLTAEYGMLPRATGERNQREAA
RGKQGGRTLEIQRLIGRSLRAALDMSKLGENTLYIDCDVIQADGGTRTASITGAMVAVIDALKVLKKRGGLKGGDPVKQM
IAAVSVGIYQGEPVLDLDYLEDSAAETDLNVVMTDAGGFIEVQGTAEGAPFHADELNAMLALAHDGVRQLFELQRAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-61 61