Gene Information

Name : PST_3819 (PST_3819)
Accession : YP_001174284.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Resistance
Product : multidrug efflux SMR transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 4131885 - 4132244 bp
Length : 360 bp
Strand : +
Note : Code: P; COG: COG2076

DNA sequence :
TTGCCCGCCCATAATCAGGATCTCGCCATGTCCGGCTATGTTTACCTGGCCTTCGCCATCTGCGCCGAGGTGGTCGCCAC
CACCTCGATGAAGGCACTGGCCGGCTTCAATCGTCCGCTGCCACTGCTGCTGGTGGTGACGGGCTACAGCCTGTCGTTCT
GGATGCTCGCGCTGGTGGTACGGACCATCCCGGTAGGCATCGCCTATGCCATCTGGGCCGGGCTCGGCATCGTGCTGGTC
AGCGTCGCCGCGGCGGTGCTCTATCGTCAGTACCTGGACCTGCCGGCGGTACTGGGCATGGGGCTGATCATCGCCGGTGT
GGTGGTCATCCAGTTGTTCTCCCGCAGTGCAGGCCACTAA

Protein sequence :
MPAHNQDLAMSGYVYLAFAICAEVVATTSMKALAGFNRPLPLLLVVTGYSLSFWMLALVVRTIPVGIAYAIWAGLGIVLV
SVAAAVLYRQYLDLPAVLGMGLIIAGVVVIQLFSRSAGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-15 46
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 3e-15 46
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-15 46
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 3e-15 46
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 2e-15 46
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-15 46
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 2e-15 46
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 2e-15 46
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-15 46
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 2e-15 46
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-15 46
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 2e-15 46
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 3e-15 46
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 2e-15 46
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 2e-15 46
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 3e-15 46
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 2e-15 46
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 2e-15 46
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-15 46
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 3e-15 46
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 2e-15 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_3819 YP_001174284.1 multidrug efflux SMR transporter CP004022.1.gene1549. Protein 1e-25 61
PST_3819 YP_001174284.1 multidrug efflux SMR transporter BAC0377 Protein 3e-27 60
PST_3819 YP_001174284.1 multidrug efflux SMR transporter NC_002695.1.913273.p Protein 1e-18 54
PST_3819 YP_001174284.1 multidrug efflux SMR transporter BAC0150 Protein 2e-18 52
PST_3819 YP_001174284.1 multidrug efflux SMR transporter BAC0324 Protein 2e-20 50
PST_3819 YP_001174284.1 multidrug efflux SMR transporter BAC0002 Protein 7e-23 50
PST_3819 YP_001174284.1 multidrug efflux SMR transporter NC_010410.6003348.p0 Protein 7e-23 50
PST_3819 YP_001174284.1 multidrug efflux SMR transporter CP001138.1.gene1489. Protein 1e-19 46
PST_3819 YP_001174284.1 multidrug efflux SMR transporter BAC0323 Protein 9e-16 46
PST_3819 YP_001174284.1 multidrug efflux SMR transporter BAC0322 Protein 8e-20 45
PST_3819 YP_001174284.1 multidrug efflux SMR transporter BAC0192 Protein 2e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_3819 YP_001174284.1 multidrug efflux SMR transporter VFG1586 Protein 9e-16 43