Gene Information

Name : PST_3679 (PST_3679)
Accession : YP_001174144.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 3976153 - 3977673 bp
Length : 1521 bp
Strand : +
Note : Code: C; COG: COG1012

DNA sequence :
ATGCGTTACGCCCATCCCGGCAGCGAAGGCGCTGTCGTTTCCTTCAAATCCCGCTACGGCAACTACATCAACGGCCAGTT
CGTCGAGCCGGCCGGCGGTCAGTACTTCACCAACCTTTCCCCGGTCAACGGTCAGCCCATCGCCGAGTTCCCGCGCTCCG
ACGCCGCCGACATCGAGAAGGCCCTGGACGCTGCCCATGCCGCCGCCGATGCCTGGGGCAAGACCAGCGTCCAGGCGCGT
TCGCTGATCCTGTTGCAGATCGCCGACCGCATCGAGCAGAACCTGGAGATGCTCGCCATCACCGAGACCTGGGACAACGG
CAAGGCGGTGCGCGAGACGCTCAACGCCGATATCCCGCTGGCCGCCGACCACTTCCGCTATTTCGCCGGTTGCATCCGCG
CCCAGGAAGGCACCAGCGCCGAGATCGACGAACACACCGCGGCCTACCATTTCCACGAGCCGCTGGGCGTGGTGGGGCAG
ATCATCCCGTGGAACTTCCCGATCCTGATGGCCGCCTGGAAGCTCGCCCCGGCGCTGGCCGCCGGCAACTGCGTGGTGCT
CAAACCGGCCGAGCAGACCCCGCTGGGCATCAACGTGCTGCTCGAATGCATCGGCGACCTGCTGCCGCCGGGGGTGCTCA
ACGTGGTGCACGGCTACGGCCGGGAAGCCGGCGAAGCACTGGCCTCGAGCAAGCGCATCGCCAAGATCGCCTTCACCGGC
TCCACCCCGGTGGGCTCGCACATCATGAAGCGCGCCGCCGAGCACATCATTCCGAGCACCGTGGAGCTGGGCGGCAAGAG
CCCGAACATCTACTTCGAGGACATCATGCAGGCCGAACCGGCCTTCATCGAGAAGGCCGCCGAGGGGCTGGTGCTGGGCT
TCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCTCGCGCACTGGTGCAGGAGTCGATCTACGCGCCCTTCATGGAAGCG
GTGATGAAGAAGGTCGCGCAGATCAAGCGCGGCGACCCGCTGGACACCGACACCATGGTCGGCGCCCAGGCCAGCCAGCA
GCAGTTCGACAAGATCATGTCCTACCTGAAGATCGCCCAGGAAGAAGGCGCCGAAGTGCTCACCGGCGGGGCGGCCGAGA
AACTCGAAGGCTCGCTCGCCACCGGTTATTACATCCAGCCGACCCTGCTCAAGGGCACCAACAAGATGCGCGTGTTCCAG
GAGGAGATCTTCGGCCCGGTGATCGGCGTCACCACCTTCAAGGACGAGGCCGAGGCGCTGGCCATCGCCAACGACACCGA
GTACGGCCTCGGCGCCGGCGTGTGGACCCGCGACATCAACCGCGCCTATCGCATGGGCCGGGCGATCAAGGCCGGCCGTG
TCTGGACCAACTGCTACCACCTCTACCCGGCGCACGCGGCGTTCGGTGGTTACAAGAAGTCGGGCGTCGGTCGCGAGACG
CACAAGATGATCCTCGACAGCTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGCTGGGCTTCTTCTG
A

Protein sequence :
MRYAHPGSEGAVVSFKSRYGNYINGQFVEPAGGQYFTNLSPVNGQPIAEFPRSDAADIEKALDAAHAAADAWGKTSVQAR
SLILLQIADRIEQNLEMLAITETWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGTSAEIDEHTAAYHFHEPLGVVGQ
IIPWNFPILMAAWKLAPALAAGNCVVLKPAEQTPLGINVLLECIGDLLPPGVLNVVHGYGREAGEALASSKRIAKIAFTG
STPVGSHIMKRAAEHIIPSTVELGGKSPNIYFEDIMQAEPAFIEKAAEGLVLGFFNQGEVCTCPSRALVQESIYAPFMEA
VMKKVAQIKRGDPLDTDTMVGAQASQQQFDKIMSYLKIAQEEGAEVLTGGAAEKLEGSLATGYYIQPTLLKGTNKMRVFQ
EEIFGPVIGVTTFKDEAEALAIANDTEYGLGAGVWTRDINRAYRMGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMILDSYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-144 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-151 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-150 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_3679 YP_001174144.1 aldehyde dehydrogenase family protein VFG0082 Protein 2e-144 65