Gene Information

Name : PST_0364 (PST_0364)
Accession : YP_001170912.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : mutant NtrC-like activator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 418039 - 419427 bp
Length : 1389 bp
Strand : +
Note : Code: T; COG: COG2204

DNA sequence : 
ATGACTGACGCGGTGCAGGAGCGTGTCCTGCTGGTCGAGGACGATGACAGCCTGCGCCAGCTGCTGGTCGAGGAGCTGGA
GGATCGCGGGCTGCAGGTGCGCGCGCTGGCCAGCGCCGAGGAGGCGGTGGGTTCCCTGGAAAGCTGGGAGCCGGCGTTGG
TGGTCAGCGACCTGCGCCTGCCCGGCGCTGATGGCATGGCGCTGCTGCGGCGGGTGAAGAGCATGCAGGCGGCACCGGCT
TTTCTGGTGATCACCGCGTTCGGCAGCATTCAGCAGGCGGTGGCGGCGCTCAAGGAAGGCGCCGACGAATTTCTCACCAA
GCCGCTGGACCTCGAGCACTTCGCTCTGGCGGTCGGCCGTGCGCTGGAGACGCGGCGCCTGCGCGACGAAGTGCGGCGTT
TTCAGCAGCTGCTCAGCGATGATCGCTTCCACGGCATGCTCGGCCGCAGCCGGGTGATGCGCGGGCTGTTCGATCAGATC
CGCCAGCTCGCCCGTGCCGAAGGGCCGGTACTGGTGATCGGTGAGAGCGGCACCGGCAAGGAACTGGTGGCCAGGGCGGT
GCACGCCGAGAGCGAGCGCGCCGGCGGCCCGTTCCTGGCCATCAACTGCGCCGGGTTGCCGGCCGAGCTCCTGGAAAGCG
AGTTCTTCGGCCATGTCGCCGGTGCCTTCACCGGCGCCAATCGCGCGCACAAGGGGCTGTTCCAACAGGCCGACGGCGGT
ACGCTCTTTCTCGACGAGATCGGCGAGATGCCGCTGCCGCTGCAGGCCAAGCTCCTGCGCGTGCTGCAGGAAGGCACGAT
CCGCCCGGTGGGTGCCGAGCGCGAACTCAGCGTGGACGTGCGCATCATCGCCGCCAGCAATCGCCCGCTGGAAACCGAGG
CCGGGCGCGAGGCGTTCCGCGAAGACCTGTTCTTCCGTCTGGAAACCTTCATTCTGCAGGTGCCGCCGTTGCGTGATCGC
GAGGAGGATCTCGAATTGCTGGCCGCCGGCTTCGTCGCCCACTTTGCCGCGCGCGGCGGACGGCCGGTGCGCGGCATCGC
GCCGGCGGCGCTGGAGCAGCTACGCCGCTATCCGTTCCCGGGCAACGTGCGCGAGCTGCAGAACGCCATTGAGCGGGCAG
TGACCTTCTGCCACGGGCGCAGCATCGAGCTGGAGCACCTGCCCAGCCGCATCGCCAGCTACCGTGACGACAAGGCCCGC
AGCGCCGGGGCCGAGCTGCTCGCCGAGCTCAGCGATGGCCCGTTGCTGCCGACCCTGGAAGAGCTGGAACTGCGTTATAT
CGAGCACGTGCTCAAGCTGGTGGATGGCAACAAGCGCCGCGCGGCGGCCTTGCTCGGCATCGGACGGCGCACGCTGTACA
GACGCCTCGGCGAGCGCGAGGAAGGCTGA

Protein sequence : 
MTDAVQERVLLVEDDDSLRQLLVEELEDRGLQVRALASAEEAVGSLESWEPALVVSDLRLPGADGMALLRRVKSMQAAPA
FLVITAFGSIQQAVAALKEGADEFLTKPLDLEHFALAVGRALETRRLRDEVRRFQQLLSDDRFHGMLGRSRVMRGLFDQI
RQLARAEGPVLVIGESGTGKELVARAVHAESERAGGPFLAINCAGLPAELLESEFFGHVAGAFTGANRAHKGLFQQADGG
TLFLDEIGEMPLPLQAKLLRVLQEGTIRPVGAERELSVDVRIIAASNRPLETEAGREAFREDLFFRLETFILQVPPLRDR
EEDLELLAAGFVAHFAARGGRPVRGIAPAALEQLRRYPFPGNVRELQNAIERAVTFCHGRSIELEHLPSRIASYRDDKAR
SAGAELLAELSDGPLLPTLEELELRYIEHVLKLVDGNKRRAAALLGIGRRTLYRRLGEREEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-59 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-59 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_0364 YP_001170912.1 mutant NtrC-like activator BAC0467 Protein 3e-66 44
PST_0364 YP_001170912.1 mutant NtrC-like activator BAC0089 Protein 4e-73 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_0364 YP_001170912.1 mutant NtrC-like activator VFG1214 Protein 6e-70 44
PST_0364 YP_001170912.1 mutant NtrC-like activator VFG0116 Protein 7e-60 42
PST_0364 YP_001170912.1 mutant NtrC-like activator VFG1249 Protein 2e-54 42