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Name : PST_3618 (PST_3618) Accession : YP_001174088.1 Strain : Pseudomonas stutzeri A1501 Genome accession: NC_009434 Putative virulence/resistance : Resistance Product : RND efflux transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 3904490 - 3907534 bp Length : 3045 bp Strand : + Note : Code: V; COG: COG0841 DNA sequence : ATGGATTTCGCCCGTTACGCCATCACTCGGCCGGTCAATATCTGGATTCTGGTGCTCACCTGCCTGCTCGGCGGCATCCT CGCCTTCTTCGAGATCGGCCGCCTGGAAGACCCGGAATTCACCATCAAGCAGGCCATCGTCAACGTGCAGTACCCCGGCG CCACGGCGCTGGAGGTCGAGCAGCAGGTGACCGAGCCGCTGGAAAGCGCCATCCAGCAGATGTCGCAGATCAAGGAGATC CGCTCGCGCTCGATGCCGGGCATCGCCGAGATCCGCGTGGAGATGCAGGACCGCTACGACGGTGACGCGCTGCCGCAGAT CTGGGACGAGCTGCGCAACAAGATCAACGATGCCCAGGGCGACCTGCCGCCGGGCATCGAGCCGCCGCAGGTCAACGACG ATTTCGGCGATGTCTACGGCATCTTCTACGCCCTGACCGGCGACGGTCTGACGCTCAAGGAACTGCACGAAACGGCGAAG GACCTGCGCCGCGCGCTGCTCACCGCCGACGGTGTCGGCAAGGTGGAGATCGCCGGCGTGCAGGAGGAACGAATCCTGGT GGAGGTCGATCAGGCGCAGCTGGCGGCGATGAACATCGCCCCCGACGAGATCGCCGCAGCGCTGGGCGATACCGATGCCG CGGTGGAAGCCGGCGGCGTCAATGCCGGCGACTTCTTCGTGCGCCTGCGCCCCAGCGGGGCGTTCGATTCTCTGGAGGAG CTGCGCGCGCTGTCGGTCGGCCAGGGTCCGCAGCGGGTCGAGCTGGGCGCCATCGCCAAGCTCTCGCGCGACTACGCCGA GCGGCCGCAGCAGATCATCCGCCACAACGGCCAGCCGGCGCTGACGCTGGGTATCAGCGGGGTGTCCGGAGCGAACATCG TCGAGGTCGGGCACAGCGTCGAGGCGGTGCTGCAGGCCAACGAGCACCGCATGCCGCTGGGCGCCGAGCTGCACCCGCTG TACGAGCAGCACCGTATCGTCGACGAGTCGGTGAACAGCTTCGCCCTCAACGTGTTTCTCTCGGTGGCCATCGTGGTCGG CGTGCTGTGCATCGCCATGGGCCTGCGCGCCGGGGTGATCATCGGCGCGGTGCTGTTTCTCACCGTGCTCGGCACGCTGC TGGTGATGTGGCTGGCCGGCATCGAGCTGGAGCGGGTTTCCCTCGGCGCGCTGATCATCGCCATGGGCATGCTGGTGGAC AACGCGGTGGTGGTCTGCGACGGCATGCTGGTGCGTCAGCGCCAGGGCAAGAGCATTCTCGAGGCGTCGCAGCAGACGCT GCAGCAGACGCAGTGGCCGCTGCTGGGAGCGACCATCATCGGCATCCTGGCCTTCGCCGGCATCGGCCTGTCCCAGGACA CCACCGGCGAGTTCCTCTTCTCGCTGTTCTTCGTCATCGCCGTGTCGCTGCTGCTCAGCTGGTTGCTGGCCCTGCTGCTG GTACCGCTGTTCGGCCATTACCTGCTGCGCAACGCCGGCGCCGACGAGGATGCCGATGCCGCATACGACGGCCCCTGGTA CGCGCGCTATCGCCGGCTGGCTACAGGCGTGCTGCGCCGGCCGAAGCTGACCATCGGCGCGCTGCTGGTGCTGACGGTGG TCAGCGCGGTGATCTTCACCCGCCTGCCGCAGAGCTTCTTCCCGCCGTCGAGCACGCCGCTGTTCTACGTCAACCTGTTT CTGCCGCAGGGCACGCATATCCGCGATACCGCGCGCGCTGCCAGCGAGGTCGAGCAGTACCTGGCCGAGCAGGACGGCGT GAGCGATGTGTCGAGCTTCATCGGCGCCGGGGCCTCGCGCTTCATGCTCACCTACATGCCGGAGCAGCCGAATGCCTCGC TGATGCACTTTCTCGTGCGCACCGAGGATGCCGAGCGGATCGACGGCCTGGTCCGGCAGATCAACCAGGAGTTGCCGCAG CGCTATCCATCGGCGGACGTCAGCGCCGCCCAGTTCATGTTCGGCCCCAATGCCGAGGCCAAGCTGGAGGCGCGCATCAG CGGCCCGGACATCCAGGTGCTGCGCGAGATATCCGCCGAGGGGCGCAAGCGCTTGCAGGAGCAGGGGCAGGTGCTCAACG TGCGCGACGACTGGCGTCAGCCGGTACTGGTGCTGCGTCCGCAGCTGGCGCTGGATCGCCTCGCCGATGCCGGGCTGACC CGCCAGGCGGTGGCGCGCGCACTGGCTGCCGGCAGCGAGGGCCAGCGCGTCAGTCTGCTGCGCGAGCGCGACGAGCTGAT CCCGGTGCTGCTGCGTGCTGCGCCGGATGACCGCATCGACGCCGACAACCTGCTGCAACGGCTGATCTGGAGCCCGGCCG GCAACGGTTACGTGCCGCTGGCGCAGGTCGCCGACCGCATCGAACCGAGCAGCGAGGACGGCATCATCGTGCGCTACGAC CGCGAGCGCACCATCTCCATCCGCGCCGAACCGCGCGACGGCGAGAACACCAACGAGGCGCATGAGCGCATCCGTCCGCT GATCGAGGGCATCGAACTGCCGGTCAACTACAGCCTGAAGTGGGGCGGCGACTACGAGCAGTCCTCCGATGCCCAGCAGG CGCTGGCCAGCACGCTGGCGGTGCCCTACCTGGCGATGGTGCTGGTCACCGTGCTGCTGTTCGCCAAGGTGCGCCAGCCG CTGATGATCTGGCTGGTGGTACCCATGGCGATCTGCGGCGTCAGTTTCGGCCTGTTGCTCACCGGCCAGGCCTTCGGCTT CATGGCGCTGCTCGGCCTGCTCAGCCTGACCGGCATGCTGATCAAGAACGCCGTGGTGCTGGTGGACGAGATCGACCGGC AGATCGATGACGAAGTGCCACGCCTGACCGCCATCATCGAGGCCTCGGCGTCACGCCTGCGCCCGGTGATGATGGCCGCC GGCACCACGGTGCTGGGCATGGTGCCGCTGCTGTTCGACCCGTTCTTCGCCAACATGGCGGTGACCATCATGGGCGGCCT GGGCTTCGCCACGCTGCTGACGCTGCTGGCCGTGCCCTGCCTGTACCTGCTGCTGATGAAAGTGCGCCCGGAGGAAACCG CATGA Protein sequence : MDFARYAITRPVNIWILVLTCLLGGILAFFEIGRLEDPEFTIKQAIVNVQYPGATALEVEQQVTEPLESAIQQMSQIKEI RSRSMPGIAEIRVEMQDRYDGDALPQIWDELRNKINDAQGDLPPGIEPPQVNDDFGDVYGIFYALTGDGLTLKELHETAK DLRRALLTADGVGKVEIAGVQEERILVEVDQAQLAAMNIAPDEIAAALGDTDAAVEAGGVNAGDFFVRLRPSGAFDSLEE LRALSVGQGPQRVELGAIAKLSRDYAERPQQIIRHNGQPALTLGISGVSGANIVEVGHSVEAVLQANEHRMPLGAELHPL YEQHRIVDESVNSFALNVFLSVAIVVGVLCIAMGLRAGVIIGAVLFLTVLGTLLVMWLAGIELERVSLGALIIAMGMLVD NAVVVCDGMLVRQRQGKSILEASQQTLQQTQWPLLGATIIGILAFAGIGLSQDTTGEFLFSLFFVIAVSLLLSWLLALLL VPLFGHYLLRNAGADEDADAAYDGPWYARYRRLATGVLRRPKLTIGALLVLTVVSAVIFTRLPQSFFPPSSTPLFYVNLF LPQGTHIRDTARAASEVEQYLAEQDGVSDVSSFIGAGASRFMLTYMPEQPNASLMHFLVRTEDAERIDGLVRQINQELPQ RYPSADVSAAQFMFGPNAEAKLEARISGPDIQVLREISAEGRKRLQEQGQVLNVRDDWRQPVLVLRPQLALDRLADAGLT RQAVARALAAGSEGQRVSLLRERDELIPVLLRAAPDDRIDADNLLQRLIWSPAGNGYVPLAQVADRIEPSSEDGIIVRYD RERTISIRAEPRDGENTNEAHERIRPLIEGIELPVNYSLKWGGDYEQSSDAQQALASTLAVPYLAMVLVTVLLFAKVRQP LMIWLVVPMAICGVSFGLLLTGQAFGFMALLGLLSLTGMLIKNAVVLVDEIDRQIDDEVPRLTAIIEASASRLRPVMMAA GTTVLGMVPLLFDPFFANMAVTIMGGLGFATLLTLLAVPCLYLLLMKVRPEETA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 2e-155 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PST_3618 | YP_001174088.1 | RND efflux transporter | BAC0519 | Protein | 3e-163 | 44 |
| PST_3618 | YP_001174088.1 | RND efflux transporter | BAC0428 | Protein | 4e-161 | 44 |
| PST_3618 | YP_001174088.1 | RND efflux transporter | BAC0526 | Protein | 4e-165 | 42 |
| PST_3618 | YP_001174088.1 | RND efflux transporter | BAC0425 | Protein | 8e-156 | 41 |
