Gene Information

Name : PST_3394 (PST_3394)
Accession : YP_001173865.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Unknown
Product : ISPsy14, transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4584
EC number : -
Position : 3668435 - 3670093 bp
Length : 1659 bp
Strand : +
Note : Code: L; COG: COG4584

DNA sequence :
ATGCGTAATATCAAAGAATGTCTGCGCCTCAAATTTGAGGGAGGTCTCTCTCACGAGAAGATCGCCCGGGCCTTGCAGTT
GTCCAAGGGCGTCGTCAGCAAGTACGTCACGGCGGCCAACGAAACAGGCCTGGAGTGGCCGGTGCTGGCCGCGCTGGATG
AGGTCGCGCTGGCGGCGGCACTGTTGCCAACTGCCAAGGTGCGCCAGACCCGCGGCGAGCGGGTGCTGCCGGATCTGATC
ACGATCCACCGCGAATTGCGGCGCAAGGGCGTCACCCTGCAACTGCTGTGGGAGGAGTACGTCGCCGCCCATCCCGAGCA
GCCGACCTACCGCTACACCCAGTTCGTCGAGCACTACCGCCGCTACGCCAGCACGCTCAAGCGCTCGATGCGTCAACAGC
ACCGGGCCGGCGAGAAGCTGTTCATCGACTACGCCGGCCCGACCCTGCCGGTGATCGACCCAGCCACCGGCGAGATCAGC
CGGGCGCATATCTTCGTCGCGGCGCTGGGGGCCTCGAACTACACCTATGCCTGCGCCACGCCGGGTGAAGCCCAGGTGGA
CTGGCTGACCGCGCTGGGCCAGGCGTTCAGCTACTTTGGCGGGGTCAGCGAGATGGTCGTGCCGGACAACCCGCGCGCCC
TGATCGCCCATCCTGATCGCTACGAGCCGGGCTTGAACCGCGCCGCGCTGGAGTGTGCCCGGCATTACGACACGGTGATG
CTGCCGGCGCGGCCGCGTAAGCCGCAGGACAAAGCCAAGGCCGAGGTGGCGGTGCAGATCGTCGAACGCTGGATCATGGC
GCGGCTGCGCCACCAGCAGTTCTTCAGCCTGCATGCGCTCAATCAGGCGATTGCCGAGCTGCTTGAGGACTTGAACCAGC
GCCCGTTCAAGAAGCTCGACGGCTGCCGCCGGGAGTGGTTCGAGCGGCTCGATCAACCGGTGCTGCGGCCACTGCCACAG
CACCCCTACGAGGTGGTGACCTTCAAGCGCTGCAAGGTCAACATCGACTACCACATCGAAGTGAACGGCGGCTTCTACAG
CGTGCCCTCGGCCCTGGCCCGACAGAGCGTCGATGTGCGGCTGAGCGCGCATACCGTGGAAATCCTGCACGGCAACCGGC
GGGTCGCCAGCCACCTGCGACTTCAGCGGCGCGGCGCCTACAGCACCCAGAGCGAACACATGCCGGCGTCGCACAAGGCG
CACCGCGAGTGGACGCCGCAGCGCCTGCTCGACTGGGGCGAGCGAATCGGCCCGCACGCCCGGCAGATCGTCGAGTACCA
ACTGACCCACAAACCGCACCCGGAGATGGGCTATCGCGCCTGCCTGGGCCTGCTCTCGCTGGCCCGCCAGTACGGTAACG
CGCGCCTGGAGGCGGCGGCCAGCCGCGCCGTGCAACTGCGGGCGCTTAACGGCCGCACCGTGCGCAACCTGCTCAAGCAA
GGGCTCGACCAACAACCACTGCCCAAGCCCGCGACGCCGGCAGCGCAACCCAGCAGCCACGAGAACGTCCGTGGCGCCGA
TTACTACACCCAAGAGGAACTGTTCGATGATGACCCAACACACCCTGAGCCAGCTGCACCAACTGCGGCTGAGCGGCATG
GCCCGAGCGCTGGAAGAGCAGTGGACGCTGCCGGCCAGCCACAGCTTGAGCTTCGATGA

Protein sequence :
MRNIKECLRLKFEGGLSHEKIARALQLSKGVVSKYVTAANETGLEWPVLAALDEVALAAALLPTAKVRQTRGERVLPDLI
TIHRELRRKGVTLQLLWEEYVAAHPEQPTYRYTQFVEHYRRYASTLKRSMRQQHRAGEKLFIDYAGPTLPVIDPATGEIS
RAHIFVAALGASNYTYACATPGEAQVDWLTALGQAFSYFGGVSEMVVPDNPRALIAHPDRYEPGLNRAALECARHYDTVM
LPARPRKPQDKAKAEVAVQIVERWIMARLRHQQFFSLHALNQAIAELLEDLNQRPFKKLDGCRREWFERLDQPVLRPLPQ
HPYEVVTFKRCKVNIDYHIEVNGGFYSVPSALARQSVDVRLSAHTVEILHGNRRVASHLRLQRRGAYSTQSEHMPASHKA
HREWTPQRLLDWGERIGPHARQIVEYQLTHKPHPEMGYRACLGLLSLARQYGNARLEAAASRAVQLRALNGRTVRNLLKQ
GLDQQPLPKPATPAAQPSSHENVRGADYYTQEELFDDDPTHPEPAAPTAAERHGPSAGRAVDAAGQPQLELR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0005c ACA01822.1 IstA Not tested VPI-2 Protein 1e-103 47
APECO1_3528 YP_854247.1 transposase for ISEc12 Not tested PAI I APEC-O1 Protein 5e-107 47
ORF_6 AAZ04417.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 4e-107 47
unnamed CAC39294.1 hypothetical protein Not tested LPA Protein 8e-107 46