Gene Information

Name : PST_0278 (PST_0278)
Accession : YP_001170826.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Unknown
Product : S1 RNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 320898 - 323216 bp
Length : 2319 bp
Strand : -
Note : Code: K; COG: COG2183

DNA sequence :
ATGGACAGCATCAATTCCCGTATCGCCAACGAGCTGGGCGTACGCCCGCAACAGGTCGCCGCCGCCGTGGCGCTGCTCGA
CGAAGGCTCCACCGTTCCCTTCATCGCCCGCTATCGCAAGGAAGTCACCGGCAGCCTCGACGATACCCAGCTGCGTAACC
TGGAAGAGCGCCTGCGCTACCTGCGCGAGCTGGACGAGCGGCGCGTCTCGATCCTCGCCAGCATCGAGGAACAGGGCAAG
CTGACCCCCGAGCTCAAGCGCGAGATCGACCTCGCCGACACCAAGACCCGCCTCGAAGACCTCTACCTGCCCTACAAGCA
GAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGTCTCGGCGAGCTGGCCGATGCGTTGTTCGGCAATCCCGAGT
TGAATCCTGAAAGCGAAGCCACCCGTTTTATCGACGCTGAGAAGGGCTTCGCCGATGTGAAGGCCGTGCTCGAAGGCGCC
AAGTACATCCTCATGGAGCGCTTCGCCGAGGACGCCGACCTGCTGGCCAAGCTGCGGGACTTCCTCAAGCACAACGCCAC
CCTCAGTGCCCGCGTCGTACCGGGCAAGGAAACCGAAGGCGCCAAGTTCAGCGACTACTTCGAACACGACGAGGTGCTGA
AGAACACCCCTTCGCACCGCGCGCTGGCGATCTTCCGCGGGCGCAACGAGGGCATCCTCAGCGTCAGCCTCAAGGTCGGC
GACGAGACCCCGGGCAGCATGCACCCCGGCGAAGGCATGATCGGCGAGCGCTTCGGCATCGCCAACCGCGGCCGCGCCGC
CGACAAGTGGCTGGCCGAGGTGGTGCGCTGGACCTGGAAGGTCAAGCTCTACACCAGCCTGGAAACCGACCTGCTCGGCG
AGCTGCGCGACAAGGCCGAGGACGAGGCCATCTCGGTGTTCGCCCGCAACCTGCACGACCTGCTGCTGGCCGCCCCGGCC
GGTCCGCGCGCGACCCTGGCGCTGGACCCGGGCCTGCGCACCGGCTGCAAGGTCGCGGTGGTCGACGCCACCGGCAAGCT
GCTGGAAACCGCCACCGTCTACCCGCACGCACCGCGCAACGACTGGGACGGCACCCTGGCGATCCTCGCCAAGCTGTGCG
CCAAGCATGCAGTGGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGCGAGTCGGACAAGCTGGCCGGCGAGCTGATC
AAGAAAGTGCCCGGTCTCAAGCTCACCAAGATCATGGTCAGCGAGGCCGGCGCCTCGGTGTACTCGGCCTCGGAACTGGC
GGCCAAGGAATTCCCGGACCTGGACGTCTCCCTGCGCGGTGCCGTCTCCATCGCCCGCCGCCTGCAGGACCCGCTGGCCG
AGCTGGTGAAGATCGACCCGAAATCCATCGGCGTCGGCCAGTACCAGCACGACGTCTCCCAGCTCAAACTGGCACGCTCG
CTGGATGCCGTGGTCGAGGACTGCGTGAACGCCGTCGGCGTCGACGTCAACACCGCTTCCGCCGCGCTGCTGGCCCGCAT
CTCCGGCCTCAACGCGACGCTGGCGCAGAACATCGTGCAGTTCCGCGATGCCAACGGTGCGTTCAAGTCCCGCAGCGAGC
TGAAAAAGGTCCCGCGCCTGGGCGAGAAGACCTTCGAACAGGCCGCCGGCTTTCTCCGCGTGATGAACGGCGAGAACCCG
CTGGACGCCTCCGCCGTACACCCGGAAACCTATCCGCTGGTGCAACGCATCGCCCAGGACACCGGCCGCGACATCCGCTC
GCTGATCGGCGACTCGGCCTTCCTCAAGCGCCTGGACCCCAAGCAATTCACCGACGAGACCTTCGGCCTGCCCACCGTCA
CCGACATTCTCGGCGAGCTGGACAAGCCCGGCCGCGACCCGCGTCCGGAGTTCAAGACCGCCGAGTTCCAGGACGGCGTG
GAGAAGCTCAGCGATCTGGAGCCGGGCATGGTGCTCGAAGGCGTGGTGACCAACGTCACCAACTTCGGCGCCTTCGTCGA
CATCGGCGTGCACCAGGATGGCCTGGTGCACATCAGCGCGCTCTCGGAGAAGTTCGTCAAGGATCCCTACGAGGTGGTCA
AGGCCGGCGACATCGTCAAGGTCAAGGTCATGGAAGTGGATATCCCGCGCAACCGCGTCGGCCTGTCCATGCGCATGAGC
GACACGCCCGGCGCCAAGACCGACGGCCCGCAGCGCAGCGGTGGCAAGCCACGGGGCAATGCGCCGCGTAGCGAGCGCCA
CGCCAGGGAGGACAAGCCGGCACCGGCCAATGCCGCCATGGCGGCGTTGTTCGCCAACGCCAAGCAGCTGAGGAAGTAG

Protein sequence :
MDSINSRIANELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRNLEERLRYLRELDERRVSILASIEEQGK
LTPELKREIDLADTKTRLEDLYLPYKQKRRTKGQIALEAGLGELADALFGNPELNPESEATRFIDAEKGFADVKAVLEGA
KYILMERFAEDADLLAKLRDFLKHNATLSARVVPGKETEGAKFSDYFEHDEVLKNTPSHRALAIFRGRNEGILSVSLKVG
DETPGSMHPGEGMIGERFGIANRGRAADKWLAEVVRWTWKVKLYTSLETDLLGELRDKAEDEAISVFARNLHDLLLAAPA
GPRATLALDPGLRTGCKVAVVDATGKLLETATVYPHAPRNDWDGTLAILAKLCAKHAVDLIAIGNGTASRESDKLAGELI
KKVPGLKLTKIMVSEAGASVYSASELAAKEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARS
LDAVVEDCVNAVGVDVNTASAALLARISGLNATLAQNIVQFRDANGAFKSRSELKKVPRLGEKTFEQAAGFLRVMNGENP
LDASAVHPETYPLVQRIAQDTGRDIRSLIGDSAFLKRLDPKQFTDETFGLPTVTDILGELDKPGRDPRPEFKTAEFQDGV
EKLSDLEPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMS
DTPGAKTDGPQRSGGKPRGNAPRSERHAREDKPAPANAAMAALFANAKQLRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62