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Name : lysS (PST_2754) Accession : YP_001173246.1 Strain : Pseudomonas stutzeri A1501 Genome accession: NC_009434 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 2978129 - 2979409 bp Length : 1281 bp Strand : - Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGCTCAACCGCGGGCCGTTCATGGTGCTGCAGGACATGAGCGGGCGCATCCAGGTCTATGTCGATCGCAAGATGCTGCC GGCCGAGCAGGTCGAGGCGGTCAAGCACTTCGACCTGGGCGACATCATCGCCGCCGAGGGCACCCTGGCGCGCTCCGGCA AGGGTGACCTGTACGTCTACATGAACAACGTGCGCCTGCTGACCAAGTCGCTGCGCCCGCTGCCGGACAAGTTCCACGGC CTGACCGACACCGAGCAGCGCTATCGTCAGCGCTACGTCGACCTGATGGTGAACGAGGAGGTGCGCGAAACCTTCCGCGT GCGCTCGAAGGTCATCGCCCACATCCGCAAGTTCCTCGCCGAGCGTGACTTCCTCGAAGTGGAAACGCCGATGCTGCAGA CCATCCCTGGCGGCGCCGCAGCCAAGCCGTTCGAAACCCACCACAACGCGCTGGACATGCCGATGTTCCTGCGCATCGCG CCGGAGCTCTACCTCAAACGTCTGGTGGTCGGTGGCTTCGAGCGCGTGTTCGAGATCAACCGCAACTTCCGTAACGAAGG CGTCTCGACCCGGCACAACCCCGAGTTCACCATGCTCGAGTTCTACCAGGCCTATGCCGATTACGAAGACAACATGGACC TGACCGAGGAGCTGTTCCGCGAGCTGGCCCAGGCCGTGCTCGGCAGCACCGACGTGCCCTATGGCGACAAGGTGTTCCAC TTCGGCGAGCCCTTTGCGCGCCTGTCGGTGTTCGACTCCATCCTCAAGTTCAACCCGGAAATCTCGGCCTCCGATCTCAA TGATCTGGAAAAGGCCCGTGCCATCGCCAAGAAGGCGGGCGCCAAGCTGCTCGGTCATGAAGGCCTGGGCAAGCTGCAGG TGATGATTTTCGAGGAGCTGGTCGAGCACAAGCTGGAACAGCCGACCTTCATCACCGAGTATCCGTTCGAGGTCTCGCCG CTGGCCCGGCGCAACGATCGAAACCCCAACGTCACCGACCGCTTCGAGCTGTTCATTGGTGGCCGCGAGATCGCCAACGC CTATTCCGAGCTCAACGATGCCGAGGATCAGGCCGAGCGCTTCCACGCCCAGGTGGCCGACAAGGACGCCGGCGATGACG AGGCCATGCACTTCGACGCCGACTTCGTTCGTGCGCTGGAATACGGCATGCCGCCGACCGCCGGCGAGGGCATCGGCATC GACCGTCTGGTGATGCTGCTGACCAACTCGCCGTCGATCCGCGACGTGATCCTCTTCCCGCACATGCGCCCGGAACTCTG A Protein sequence : MLNRGPFMVLQDMSGRIQVYVDRKMLPAEQVEAVKHFDLGDIIAAEGTLARSGKGDLYVYMNNVRLLTKSLRPLPDKFHG LTDTEQRYRQRYVDLMVNEEVRETFRVRSKVIAHIRKFLAERDFLEVETPMLQTIPGGAAAKPFETHHNALDMPMFLRIA PELYLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQAVLGSTDVPYGDKVFH FGEPFARLSVFDSILKFNPEISASDLNDLEKARAIAKKAGAKLLGHEGLGKLQVMIFEELVEHKLEQPTFITEYPFEVSP LARRNDRNPNVTDRFELFIGGREIANAYSELNDAEDQAERFHAQVADKDAGDDEAMHFDADFVRALEYGMPPTAGEGIGI DRLVMLLTNSPSIRDVILFPHMRPEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-123 | 61 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-77 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_001173246.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 6e-124 | 61 |
