Gene Information

Name : PST_2452 (PST_2452)
Accession : YP_001172946.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Resistance
Product : DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2678380 - 2679057 bp
Length : 678 bp
Strand : +
Note : Code: TK; COG: COG0745

DNA sequence :
ATGAGCGAATTGCTGCTTATCGATGATGATCAGGAGCTGTGCGAGCTGCTGATCAGCTGGCTCGCACAGGAAGGCTTCGT
CGCCCATGCCTGCCATGACGGGCAGAGCGCGAAGCAGGCGTTGGCGCAGTATCAGCCCGCCGCGGTAGTACTGGATGTGA
TGCTGCCGGACGGCAGCGGCCTTGAACTGCTCAAGCAGCTGCGCAGCGAACATCCGGACCTCCCGGTGTTGATGCTGTCC
GGTCGTGGCGAACCGCTGGACCGCATTCTCGGCCTCGAACTGGGTGCCGACGACTATCTGGCCAAGCCCTGCGACCCACG
CGAACTGACCGCGCGTCTGCGAGCTGTGCTGCGCCGCAGCCAACCGGCAGCCGCGCCCAGCCAGCTCGAACTCGGCGACC
TCAGCTACAGCCCCGCCCGCGGCGTTGCCAGTGTCGGCGGGCATGACGTCAGCCTGACGCTGTCCGAAGGCCGCATCCTT
GAGGCCCTGCTGGCCCAGGCCGGCGAGCCGATCGACAAGCAGGCCCTGGCCCAGCACGCCCTGGGTCGCAAGCTCACGCT
CTACGACCGCAGCCTGGACATGCATGTCAGCAACCTGCGCCGCAAACTGGGCCCGCACGCCGACGGCAGCCCGCGGATCG
TCGCCCTGCGCAGCCGTGGCTATCTCTATTCGGCCTGA

Protein sequence :
MSELLLIDDDQELCELLISWLAQEGFVAHACHDGQSAKQALAQYQPAAVVLDVMLPDGSGLELLKQLRSEHPDLPVLMLS
GRGEPLDRILGLELGADDYLAKPCDPRELTARLRAVLRRSQPAAAPSQLELGDLSYSPARGVASVGGHDVSLTLSEGRIL
EALLAQAGEPIDKQALAQHALGRKLTLYDRSLDMHVSNLRRKLGPHADGSPRIVALRSRGYLYSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_2452 YP_001172946.1 DNA-binding response regulator CP000675.2.gene1535. Protein 3e-47 49
PST_2452 YP_001172946.1 DNA-binding response regulator CP000034.1.gene3834. Protein 4e-41 46
PST_2452 YP_001172946.1 DNA-binding response regulator CP001138.1.gene4273. Protein 2e-41 46
PST_2452 YP_001172946.1 DNA-binding response regulator BAC0533 Protein 7e-42 46
PST_2452 YP_001172946.1 DNA-binding response regulator NC_002695.1.915041.p Protein 4e-41 46
PST_2452 YP_001172946.1 DNA-binding response regulator CP000647.1.gene4257. Protein 7e-42 46
PST_2452 YP_001172946.1 DNA-binding response regulator CP001918.1.gene5135. Protein 4e-37 46
PST_2452 YP_001172946.1 DNA-binding response regulator CP004022.1.gene3215. Protein 1e-39 44
PST_2452 YP_001172946.1 DNA-binding response regulator CP001485.1.gene721.p Protein 2e-38 44