Gene Information

Name : PST_2358 (PST_2358)
Accession : YP_001172855.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : chaperone-associated ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2577717 - 2580611 bp
Length : 2895 bp
Strand : -
Note : Code: O; COG: COG0542

DNA sequence :
ATGCCTCTTCGACTGCTACCCCTGTGCCTGATCGCACTCGGCATTCGCCGTACGAAGCCCAGATATTTCTTGACTTTTAA
CAGTTCCGGCGCAGAGTTTGTAAAGTACTGTAAAAAAAACCCTTGGGCTTGGCTGAATTTGGTTTTCCGGCGCTTGTCAT
GCCGCGCTTGCCAGCAAAAGCGCGCCATTTCCCCGCTGGAAGCCCTTTTCGGCTCGCGCAGCGGCCTGTTCGAAGATTTT
CTCGGCAGCGATTTCTTCCGCATCGGAGAAGAGTCGGCACCGGCTGCAGCCGCTGCCGATGAAGTGGACGATGCGCCGTT
TGGCGAACCAGCCTCCACAGCATCTGGCATGCCGCGCCGTCGCGGTAGCGGGTTGGCCAGCCGCATCAGCGAGCACTCCG
AGGCGCTGTTGCAGGAAGCCGCCAAGCATGCCGCGGACTTCGGTCGCTCCGAAGTCGATACGGAACACCTGCTGCTGGCG
CTGGCCGACAGCGATGTGATCAAGACCATCCTGAGCCAGTTCAAGATCAAGGTCGATGACCTCAAACGCCAGATCGAAGC
CGAAGCCAAGCGCGGCGACAAGCCGTTCGAAGGCGAGATCGGCGTGTCGCCACGGGTGAAGGATGCGCTCAGTCGCGCCT
TCGTCGCCTCCAATGAATTAGGACACTCCTACGTCGGGCGCGAGCACTTCCTGATCGGTCTGGCCGAAGAGGGCGAGGGG
CTGGCCGCCAACTTGCTGCGCCGCTATGGCCTCACGCCGCAGGCCCTGCGCCAGCAGGTAAACAAGGTGGTCGGCAAAGG
TGCGGAGGATGGCCGCGCCGAGACGCCGACCAATACGCCGGAGCTCGACAAGTATTCGCGCGATCTCACCAAGATGGCCC
ATGCGGGCAAGCTGGATCCGGTCATCGGCCGCGCGCAGGAAATCGAAACCACCATCGAGGTGCTGGCGCGGCGCAAGAAG
AACAACCCCGTACTGATCGGTGAGCCTGGCGTGGGCAAGACCGCCATCGTCGAAGGGCTGGCACAGCGCATGGTGGCTGG
CGAGGTGCCCGAGACGCTGCGCGACAAGCGCCTGGTGGAGCTGAACATCAATTCCATGGTGGCCGGCGCGAAGTACCGTG
GCGAGTTCGAGGAGCGGGTGCAGAAGGTGCTGAAGGAGATCGCCGAGCACCAGGGCGAGATGATCCTCTTCATCGACGAG
GTGCACACCATCGTAGGTGCCGGCCAGGGCGGCGGCGAAGGCGGGTTGGACGTGGCCAACGTCTTCAAGCCGATGATGGC
GCGTGGTGAGCTGAACCTGATCGGCGCGACGACGCTCAACGAGTACCAGAAGTACATCGAGAAGGACGCCGCGCTGGAGC
GGCGCTTCCAGCCGGTCATGGTGCCCGAGCCAACGGTGGCGCAGACCATCATGATCCTGCGCGGCCTGCGCGACACCTTC
GAAGCGCACCACAAGGTCAGCATCACCGAGGACGCGATCATCGCGGCCGCCGAGCTGTCCGATCGCTACGTCACCGCGCG
CTTTTTGCCGGACAAGGCCATCGATCTGCTCGATCAGGCTGCCGCCCGTGTGAAGCTGTCGGCGACGGCCCGCCCCGTTG
CGGTGCAGGAGTTGGAGGCCGAACTGCACCAGTTGCGTCGAGAGCAGGACTACCTGGCCTCCCGCAAGCAATACGACAAC
GCGGCGGAGGTCGGCAAACGCATCGAAGCCAAGGAGGCCGAACTCAAGACGCAGGTCTACGACTGGGAGCGCGAGCGCGG
CTCGGGCAGCGCCGAAGTCAAGGCGGAACACGTGGCGCAGATCGTCTCGCGTCTGACCGGCATCCCGGTCAATGAGCTGA
CCGTGGAGGAGCGCGAGAAGCTGCTGCACCTGGAGCAGCGGCTGCACGAGCGCCTGGTGGGGCAGGACGAGGCGGTACGC
GCGGTGGCGGATGCGGTGCGGCTGTCGCGCGCGGGTCTGCGCGAAGGCAGCAAGCCCGTGGCCACGTTCCTGTTCCTGGG
GCCCACCGGTGTCGGCAAGACCGAACTCGCCAAGGCGCTGGCCGAATCCGTCTACGGCAACGAGAGCGCCCTGTTGCGCA
TCGACATGTCGGAGTACGGCGAGCGCCATACCGTGGCGCGGCTGGTGGGCGCTCCACCGGGCTACGTCGGCTATGACGAA
GGCGGCCAGCTCACGGAGAAGGTCCGTCGCAAGCCCTACAGCGTGCTGCTGCTCGACGAGATCGAGAAGGCTCACCCCGA
TGTCTACAACATCCTGCTGCAGGTGTTCGACGACGGGCGGCTCACCGACGGTAAGGGTCGCGTGGTGGACTTCACCAACA
CCATCATCATCGCCACCTCCAACCTGGGCTCCGACATCATTCAGCGCCGGCTGAAGGCGCGCGGAGCGGCCGGCGAGGAG
TACGAGAAGACCAAGGCAGAGGTGATGGACGTGCTGCGCGGGCACTTCCGCCCCGAATTCCTCAACCGCATCGACGAGCT
CATCGTCTTCCATGCGCTGGGCAGGGAGGAGATCCGCCACATCGTCGGCCTGCAACTCGATCGCGTGGCCCGCAGTGCCG
CAAGCCAGGGCGTGACGCTGACGTTCGATGGGACGCTGGTCGATCACTTCGCGGAAGAAGGCTACAAGCCCGAATTCGGC
GCTCGCGAGCTCAAGCGACTGATTCGCAGCGAGTTGGAAACGGCACTGGCGCGCGAGATGCTCGGCGGTGGCATCGGCAA
GGGCGATCACGCCCATGCACGTTGGGACGACAAGGCGGAGCGGGTCGCCTTCGACCGCAAGCAACCCGCTCCGACCAGCG
CCGAAGCACCCTCTGGATCTGCGCAACCGCCGGGCCCGCCCAGGGAGTCGAGCAAGGGGACGCGCAAGAAGAAGTCCGAA
AGTGGCAAGGCATGA

Protein sequence :
MPLRLLPLCLIALGIRRTKPRYFLTFNSSGAEFVKYCKKNPWAWLNLVFRRLSCRACQQKRAISPLEALFGSRSGLFEDF
LGSDFFRIGEESAPAAAAADEVDDAPFGEPASTASGMPRRRGSGLASRISEHSEALLQEAAKHAADFGRSEVDTEHLLLA
LADSDVIKTILSQFKIKVDDLKRQIEAEAKRGDKPFEGEIGVSPRVKDALSRAFVASNELGHSYVGREHFLIGLAEEGEG
LAANLLRRYGLTPQALRQQVNKVVGKGAEDGRAETPTNTPELDKYSRDLTKMAHAGKLDPVIGRAQEIETTIEVLARRKK
NNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVELNINSMVAGAKYRGEFEERVQKVLKEIAEHQGEMILFIDE
VHTIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEKDAALERRFQPVMVPEPTVAQTIMILRGLRDTF
EAHHKVSITEDAIIAAAELSDRYVTARFLPDKAIDLLDQAAARVKLSATARPVAVQELEAELHQLRREQDYLASRKQYDN
AAEVGKRIEAKEAELKTQVYDWERERGSGSAEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVR
AVADAVRLSRAGLREGSKPVATFLFLGPTGVGKTELAKALAESVYGNESALLRIDMSEYGERHTVARLVGAPPGYVGYDE
GGQLTEKVRRKPYSVLLLDEIEKAHPDVYNILLQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKARGAAGEE
YEKTKAEVMDVLRGHFRPEFLNRIDELIVFHALGREEIRHIVGLQLDRVARSAASQGVTLTFDGTLVDHFAEEGYKPEFG
ARELKRLIRSELETALAREMLGGGIGKGDHAHARWDDKAERVAFDRKQPAPTSAEAPSGSAQPPGPPRESSKGTRKKKSE
SGKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-162 47
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 7e-90 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_2358 YP_001172855.1 chaperone-associated ATPase VFG0079 Protein 1e-173 50