Gene Information

Name : gacA (PST_2085)
Accession : YP_001172595.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator GacA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2266821 - 2267450 bp
Length : 630 bp
Strand : +
Note : Code: TK; COG: COG2197

DNA sequence :
GTGGTCGATGACCACGATCTGGTTCGTACGGGCATCAGTCGCATGCTGGCGGACATCTCCGGCCTTCAGGTGATAGGTCA
GGCGGATTCCGGTGAAGACGCGATCCGCAAGGCTCGGGAACTCAAGCCCGATGTGGTGCTGATGGACGTCAAGATGCCGG
GCATCGGTGGCCTGGAGGCGACCCGAAAGCTGCTGCGCAGCTACCCTGACCTCAAGGTCATTGCCGTCACCATCTGCGAA
GAAGATCCGTTCCCTACGCGGCTGCTGCAGGCCGGGGCGGCGGGTTATCTGACCAAGGGCGCGGCCCTGGAAGAGATGGT
GCAGGCCATTCGCATGGTGTTCGGCGGCCAACGCTACATCAGCCCGCAGATCGCCCAGCAGCTGGCGCTCAAGTCGTTCC
AGCCCCAGCTCAGCGAATCGCCGTTCGATCTGCTTTCCGAACGGGAAATCCAGATCGCGCTGATGATCGCCAATTGTCAG
AAGGTGCAGAGCATCTCCGACAAGCTCTGCCTGTCGCCGAAAACGGTGAACACCTACCGCTATCGCATCTTCGAAAAGCT
GTCGATCACCAGTGATGTCGAGCTGGCCCTGCTGGCGGTCTGCCACGGGATGGTCGACACCGTCAACTGA

Protein sequence :
MVDDHDLVRTGISRMLADISGLQVIGQADSGEDAIRKARELKPDVVLMDVKMPGIGGLEATRKLLRSYPDLKVIAVTICE
EDPFPTRLLQAGAAGYLTKGAALEEMVQAIRMVFGGQRYISPQIAQQLALKSFQPQLSESPFDLLSEREIQIALMIANCQ
KVQSISDKLCLSPKTVNTYRYRIFEKLSITSDVELALLAVCHGMVDTVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-54 59
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-54 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA YP_001172595.1 DNA-binding response regulator GacA VFG1889 Protein 4e-52 56