Gene Information

Name : PST_2071 (PST_2071)
Accession : YP_001172581.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 2248226 - 2249746 bp
Length : 1521 bp
Strand : +
Note : Code: C; COG: COG1012

DNA sequence :
ATGATCTACGCCCAGCCCGGTACCCCAGGCGCCGTCGTTTCCTTCAAGCCCCGTTACGGCAACTACATCGGTGGTGAGTT
CGTCCCGCCGGTCAAAGGCGAGTACTTCGTCAACACCTCGCCCGTCAATGGTGAAGTGATCGCCGAATTCCCGCGTTCGG
GCGCTGAAGACATCGAGAAGGCGCTGGATGCCGCGCATGCAGCCGCCGACGCCTGGGGTCGTACCTCGGTGCAGGACCGC
GCCAATATCCTGCTGAAGATTGCCGATCGCATCGAAGCCAACCTGGAAAAACTTGCCGTCGCCGAAACCTGGGACAACGG
CAAGGCCGTTCGTGAAACCCTGAACGCCGACGTACCGCTGGCCGCCGACCACTTTCGCTACTTCGCCGGTTGCATCCGAG
CCCAGGAAGGCAGCGCCGCCGAAATCAACGAGCACACCGCGGCCTACCATTTCCACGAGCCGCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCGGCCTGGAAACTGGCTCCGGCCCTGGCTGCCGGTAACTGCATCGTGCT
CAAGCCCGCCGAACAGACTCCGCTGTCGATCATGGTCCTGATCGAGATCATCGGTGACCTGCTGCCAGCGGGCGTGCTGA
ACATCGTTCAGGGATTCGGCCGCGAAGCTGGTCAGGCGTTGGCGACCAGCACCCGCATTGCCAAGATCGCCTTTACCGGC
TCGACCCCGGTTGGCTCGCACATCATGCGTTGCGCGGCCGAGAACATCATCCCCAGCACCGTGGAACTGGGTGGCAAGAG
CCCGAACATCTTCTTCGAAGACATCATGAATGCGGAGCCTGCGTTCATCGAGAAAGCCGCTGAAGGTCTGGTACTGGCCT
TCTTCAACCAGGGCGAGGTCTGCACCTGCCCGTCGCGTGCGCTGATTCAGGAATCGATCTTCGAGCCCTTCATGGAAGTG
GTGATGAAGAAGGTCAAGGCGATCAAGCGCGGCAACCCGCTGGATACCGACACCATGGTCGGCGCCCAGGCGTCCGAGCA
GCAGTTCGACAAGATCCTTTCCTACATGGAAATCGCCCAGCAGGAAGGCGCGCAGATCCTCACCGGCGGCGCAGCCGAGA
AGCTCGAAGGCGGCCTGGCCTCCGGTTACTACGTGCAGCCGACCCTGATCAAGGGTCACAACAAGATGCGTGTGTTCCAG
GAAGAAATCTTCGGCCCGGTGGTCGGCGTCGCTACCTTCAAGGACGAAGCCGAAGCCCTGGCCATTGCCAACGATACCGA
GTTCGGCCTGGGCGCTGGCGTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGTCGCGGCATCAAGGCCGGCCGTG
TCTGGACCAACTGCTACCACCTGTATCCGGCACATGCCGCGTTCGGCGGCTACAAGAAGTCCGGTGTCGGTCGCGAAACG
CACAAGATGATGCTCGACCACTATCAGCAGACCAAGAACCTGCTGGTCAGCTACGACATCAATCCGCTCGGCTTCTTCTG
A

Protein sequence :
MIYAQPGTPGAVVSFKPRYGNYIGGEFVPPVKGEYFVNTSPVNGEVIAEFPRSGAEDIEKALDAAHAAADAWGRTSVQDR
ANILLKIADRIEANLEKLAVAETWDNGKAVRETLNADVPLAADHFRYFAGCIRAQEGSAAEINEHTAAYHFHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCIVLKPAEQTPLSIMVLIEIIGDLLPAGVLNIVQGFGREAGQALATSTRIAKIAFTG
STPVGSHIMRCAAENIIPSTVELGGKSPNIFFEDIMNAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALIQESIFEPFMEV
VMKKVKAIKRGNPLDTDTMVGAQASEQQFDKILSYMEIAQQEGAQILTGGAAEKLEGGLASGYYVQPTLIKGHNKMRVFQ
EEIFGPVVGVATFKDEAEALAIANDTEFGLGAGVWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-146 66
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-154 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-154 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-154 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-153 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_2071 YP_001172581.1 aldehyde dehydrogenase VFG0082 Protein 6e-147 66