Gene Information

Name : PST_1859 (PST_1859)
Accession : YP_001172375.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Unknown
Product : IS3 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2010559 - 2011404 bp
Length : 846 bp
Strand : -
Note : Code: L; COG: COG2801

DNA sequence :
GTGGAGTACCCGGTACGGCGTCTCTGCCAGACCCTCCAGGTACATCCCAGCGGTTACTACGCCTGGCTGGCCGAGCCGAA
ATCCGCGCGTGCCAAGGAAGATCAGCGTCTGCTCGGATTGATCAAGCATGCCTGGTTGGAAAGCGGCGGGGTCTACGGCT
ACCGCAAGATCCACGACGACCTGCGTGAGCTGGGCGAGTCCTGTGGCCGGCACCGTGTGGCTCGCCTGATGAGGAGAGAG
GGGCTGCGCTCGCAGACCGGTTATCGCCGGCGCCCCGGGTACTACGGTGGCAAGCCGCCGGTGGCCTCGCCCAACCGTCT
GGAGCGGCAGTTCAATGTCAGTGAACCGAACAAGGTCTGGGTCACCGACATCACTTACATCCGCACGTATGAGGGCTGGT
TGTACTTGGCGGTGGTGCTGGATCTGTTTTCTCGCCAAGTGATCGGCTGGTCGATGAAGCCTCGGATGTGCAGCGATCTG
GCCATCGATGCGTTGCTGATGGCGGTGTGGCGGCGCAAGCCCAAGCAGGAAGTGATGATCCATTCCGACCAGGGCAGCCA
GTTCAGCAGCTCGGACTGGCAGAGTTTCCTCAAGGCCAACAACCTGATCAGCAGCATGAGTCGACGCGGTAACTGTCACG
ACAACGCGGTCGCGGAAAGCTTTTTCCAGTTGCTGAAGCGAGAACGCATCCGACGGAAAACCTACGGAACCCGCGAAGAA
GCCCGCAGTGATGTGTTCGATTACATCGAGATGTTCTATAACCCCAAGCGCCGGCACAGCAGCGCTATGCAGCTATCGCC
AGTGGAGTTTGAAAAGCGCTATTTCCAGAGCTTGGAGAGTGTCTAG

Protein sequence :
MEYPVRRLCQTLQVHPSGYYAWLAEPKSARAKEDQRLLGLIKHAWLESGGVYGYRKIHDDLRELGESCGRHRVARLMRRE
GLRSQTGYRRRPGYYGGKPPVASPNRLERQFNVSEPNKVWVTDITYIRTYEGWLYLAVVLDLFSRQVIGWSMKPRMCSDL
AIDALLMAVWRRKPKQEVMIHSDQGSQFSSSDWQSFLKANNLISSMSRRGNCHDNAVAESFFQLLKRERIRRKTYGTREE
ARSDVFDYIEMFYNPKRRHSSAMQLSPVEFEKRYFQSLESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-38 45
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-38 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 1e-44 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 8e-45 45
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 1e-46 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 3e-44 44
unnamed CAI43898.1 putative transposase Not tested LEE Protein 8e-31 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 8e-31 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-40 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-40 42
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-40 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_1859 YP_001172375.1 IS3 family transposase VFG1631 Protein 8e-47 44