Gene Information

Name : PST_1704 (PST_1704)
Accession : YP_001172226.1
Strain : Pseudomonas stutzeri A1501
Genome accession: NC_009434
Putative virulence/resistance : Virulence
Product : reverse transcriptase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3344
EC number : -
Position : 1831696 - 1832724 bp
Length : 1029 bp
Strand : +
Note : Code: L; COG: COG3344

DNA sequence : 
GTGGATTACCCCACGGTCTCTGACCGTGTTGCGCAAACCGTAGTCAAGCTTCTCATCGAGCCAGAGCTGGACTCGATCTT
CCATCCGGACTCTTATGGGTATCGGCCTGGACGGTCGGCGAAGCAGGCCGTGGCAATCACTCGTGAACGCTGCTGGCGAT
ATGACTGGGTCGTGGAGTTTGATATCAAGGCGGCTTTCGATCAGATTGATCATGGGCTGCTGATGAAAGCGGTACGCGCC
CACATCAAGGAAGACTGGATTCTTCTGTACATTGAGCGGTGGCTGGTTGCTCCGTTCGAAACGAAGGACGGCGTTTGCGT
TCCACGCGACCGCGGCACTCCGCAAGGAGGAGTAGTCAGTCCAATCCTGATGAATCTGTTCATGCACTACGCCTTCGACA
TGTGGATGCAACGCACCAGCGCGAACTGTCCGTTCGCCCGGTATGCAGACGATGCGGTGGTTCACTGCCGTAGTCGGAAG
CAGGCGGAATATATGATGCGAACCATCGCGTCACGGCTAGCGGACTGCGGGCTGACGATGCATCCTGAGAAATCGAAGAT
CGTGTATTGCAAGGACAGCAACCGTACCGAACAGCATCTGCATGTGAGCTTCACCTTCCTGGGTTTTATGTTCAGGCCGA
GGAAGGCACTCAGCAAAGAAGGCAGGCTTTTCACGAGCTTCCTTCCGGGAGCGAGCGAGGGTGCCTTGAAGCGGATGCGG
CAAACGGTGCGCAGGTGGCGACTCAATAGTCAAACCCACGTGACGCTGGCCGATGTGGCTCGGCTATACAATCCGGTGAT
ACAGGGGTGGTGGCACTACTATGGCTCGTTTTATCGGACGTCCATGCTTGGCATCTTCCAACACATTGACCGCGCACTTG
AACGCTGGGCCCGACGAAAGTACAAGGCCCTTCACAGGCGGAAGCGGCGTGGTAGCCGATGGGTGGAAAAGATGCGTATG
GCGGCACCCCGACTGTTCCATCACTGGCGAGTGGCTGGGCAACAAGGTTGGATAACGGGAGCCGTATGA

Protein sequence : 
MDYPTVSDRVAQTVVKLLIEPELDSIFHPDSYGYRPGRSAKQAVAITRERCWRYDWVVEFDIKAAFDQIDHGLLMKAVRA
HIKEDWILLYIERWLVAPFETKDGVCVPRDRGTPQGGVVSPILMNLFMHYAFDMWMQRTSANCPFARYADDAVVHCRSRK
QAEYMMRTIASRLADCGLTMHPEKSKIVYCKDSNRTEQHLHVSFTFLGFMFRPRKALSKEGRLFTSFLPGASEGALKRMR
QTVRRWRLNSQTHVTLADVARLYNPVIQGWWHYYGSFYRTSMLGIFQHIDRALERWARRKYKALHRRKRRGSRWVEKMRM
AAPRLFHHWRVAGQQGWITGAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13526.1 reverse transcriptase Not tested PAGI-7 Protein 8e-149 88
unnamed CAD33771.1 putative reverse transcriptase Not tested PAI I 536 Protein 4e-66 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PST_1704 YP_001172226.1 reverse transcriptase VFG1512 Protein 3e-66 42