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Name : xcpR (PST_0125) Accession : YP_001170674.1 Strain : Pseudomonas stutzeri A1501 Genome accession: NC_009434 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 145398 - 147119 bp Length : 1722 bp Strand : + Note : Code: NU; COG: COG2804 DNA sequence : ATGAATGACGCGCCATTGACGTGGTATTCGTCAGCGGTGCCGGGCGTCTGCGACCTTGGTGCCGGGTTAAGTCGGCTAAT CAGGAAAAACGCACGCACGTTGAAATGTCATCCAATCCTTGTAGTCCAACTAGGCTGGTTGGACCCGATTGGAGTGTTTC GAGCGCGGCGACGTCGGGTCGTTGCGTATCGCCGGTGGAGCTGCACGATGCCCGAACTCGATGTAAACGACGTGACCACG CTGCTCGAGCAGCCCGCGCAACGCCGCCTGCCGTTCGCCTTTGCTCGTCGCCACGGCGTGCTGCTGCTCGAGCGCGGCGG CGAGCTGCGTCTGGCCCTGCGTGAAGGTGCCGCGCTGACCGCGGTACAGGAGGCGCAGCGGGTGGTCGGCATGCGCCTGC CCATGCAGTGGCTGGCCCAGGCGGATTTCGACCAGGCCCTCGGCGCGGCCTACCAGCACGATTCATCGGCGGCGATGTTG ATGGTCGAGGGGCTGGGCAACGACCTCGACCTGGCCAGCCTGGCCGATCAGATCCAGGAAACCGAGGACCTGCTGGAGCA GGAGGACGACGCGCCGATCATCCGTCTGATCAACGCCATTCTCGGCGAGGCGATTGCCGAGAACGCCTCGGATATCCATA TCGAAACCTTCGAGAAGCGCCTGGTGATCCGCTTTCGGGTCGACGGCATCCTCCGCGAAGTGGTGCAGCCCAAGCGCGAG CTGGCGGCGCTGCTGGTCTCGCGGATCAAGGTCATGGCCAAGCTGGACATCGCCGAGAAGCGCATCCCGCAGGACGGGCG TATCTCGCTGCGGGTCGGCGGTCGCGAGGTGGACATCCGCGTTTCCACGCTGCCCTCGGCCAATGGCGAGCGGGTGGTAC TGCGCCTGCTGGACAAGCAGGCCGGGCGCCTGACCCTGCGTCATCTCGGCATGAACGAGCAGGACCGCCGCCAGCTGGAG CAGGCGGTGAAGAAGCCCCACGGCATCATCCTGGTCACCGGCCCCACCGGTTCGGGCAAGACCACCACGCTCTATGCCGC GTTGACGACCCTCAACGATCGTACGCGCAACATCCTCACCGTCGAGGATCCCATCGAGTACCACCTCGAAGGCATCGGCC AGACCCAGGTCAACACCAAGGTCGACATGACCTTCGCCCGCGGCCTGCGCGCCATCCTGCGTCAGGATCCGGACGTGGTG ATGGTCGGCGAGATCCGCGACCAGGAAACCGCCGACATGGCCGTGCAGGCCTCGCTCACCGGTCACCTGGTGCTCTCCAC GCTGCACACCAACAGCGCCATTGGCGCCGTCACGCGCCTAGTGGACATGGGCGTCGAGCCGTTTCTAATCTCCTCGTCGC TGCTTGGCGTGCTGGCCCAGCGCCTCGTGCGGGTGCTGTGTAATGACTGCAAACGCGCCTACATCGCCGATGCCGCCGAG TGCGAGCTGCTCGGCGTCAGTCCGGCCGAGGCGCCGACGCTGTACCACGCCGAAGGCTGCGAGCAATGCCGTGGCCTCGG CTACCGCGGGCGTACCGGCATCTATGAGCTGGTGCTGTTCGACGACACCCTGCGCACCATGGTGCACACCCGCGCCAGCG AGCAGGACATGCTGCGCCATGCCCGTGAGCTGGGCCCGAGCATCCGCGAGGACGGGCTGCGCAAGGTGCGCGAGGGGGTG ACCACCATCGAGGAAGTGCTGAGGGTGACGCGTGAGGAGTGA Protein sequence : MNDAPLTWYSSAVPGVCDLGAGLSRLIRKNARTLKCHPILVVQLGWLDPIGVFRARRRRVVAYRRWSCTMPELDVNDVTT LLEQPAQRRLPFAFARRHGVLLLERGGELRLALREGAALTAVQEAQRVVGMRLPMQWLAQADFDQALGAAYQHDSSAAML MVEGLGNDLDLASLADQIQETEDLLEQEDDAPIIRLINAILGEAIAENASDIHIETFEKRLVIRFRVDGILREVVQPKRE LAALLVSRIKVMAKLDIAEKRIPQDGRISLRVGGREVDIRVSTLPSANGERVVLRLLDKQAGRLTLRHLGMNEQDRRQLE QAVKKPHGIILVTGPTGSGKTTTLYAALTTLNDRTRNILTVEDPIEYHLEGIGQTQVNTKVDMTFARGLRAILRQDPDVV MVGEIRDQETADMAVQASLTGHLVLSTLHTNSAIGAVTRLVDMGVEPFLISSSLLGVLAQRLVRVLCNDCKRAYIADAAE CELLGVSPAEAPTLYHAEGCEQCRGLGYRGRTGIYELVLFDDTLRTMVHTRASEQDMLRHARELGPSIREDGLRKVREGV TTIEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-123 | 62 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-123 | 62 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpR | YP_001170674.1 | general secretion pathway protein E | VFG0182 | Protein | 4e-163 | 81 |
| xcpR | YP_001170674.1 | general secretion pathway protein E | VFG2048 | Protein | 6e-123 | 61 |
| xcpR | YP_001170674.1 | general secretion pathway protein E | VFG1876 | Protein | 8e-120 | 57 |
