Gene Information

Name : Rsph17025_4386 (Rsph17025_4386)
Accession : YP_001170536.1
Strain :
Genome accession: NC_009432
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 30901 - 31851 bp
Length : 951 bp
Strand : +
Note : PFAM: protein of unknown function DUF932

DNA sequence :
GTGTTTCCGAAGAACAGATCGGAGAGGCCGCGCCCATTGGCGGATGCGGGCGGAAGGCCCCACCGCCGCTCATCGAAGGA
GACCCACATGGGCTATCACCATTACATGCGCGGGATGAGCAACGGTGGCTCGATCTTCAGCCGGGGCGAGCCGCTGACCA
ACGCCGAACTTCACGCGCGCGTCCCGTCGATCTTCGCCACTGAGGCGCATGAAAGCCGCAGCGCCCGCTTCGCCCCGGTA
CCGACCATCACCGTGCTGGACGGCCTGCGCGCCGAGGGCTTCGAGCCGTTCTTCGCCCAGCAGGCCCGCACCCGCATCGA
AGGCAAGGCCGAGTTCACCAAGCACATGCTGCGCCTGCGCCATCGGGGCATCGTCAACGAGGCAGGCGAGGCGTTCGAGA
TCGTGCTGGTCAACGCGAACGACGGCACGAGCGCCTATCAGATGATCCCGGGGTTCTTCCGCTTCGTTTGCGCCAATGGT
CTCATGGCTGGCGAAACCTTCGAGGAGGTGAAGGTTCGCCACAGCGGCAACGCCATCGGCGAGGTGATCGAGGGCGCCTA
CCGCGTCCTCGAGGATGCGCCGCGCGTGGCCGATCAGGTCCAGCGGTTCAAGTCGATCCGCTTGCAGGACCGCGAGCGCG
AGATCCTGGCCGAGGCTGCCCACAGCCTCCGCTTCCCGGCAACGGCGGAAGGCAAGGCGGCCCCGATCGACCCCCCTGCC
CTTCTGCGGCCCCGCCGCTCCGAGGATCGCGCGACTGACCTCTGGACCGCCTTCAACGTCGTGCAGGAGAACACCCTGCG
CGGCGGGATGCGCGGCCGGATCGAGACCGACAGCGGGTTCATCCGCCGTCAGACGGTTCGCGAGGTCACCGGGATCGACC
AGTCTCGCGCGCTGAACCGCGCGCTCTGGATGCTCACCGAGCGCATGGCCGAGTTGAAGTCGGCGGCGTAA

Protein sequence :
MFPKNRSERPRPLADAGGRPHRRSSKETHMGYHHYMRGMSNGGSIFSRGEPLTNAELHARVPSIFATEAHESRSARFAPV
PTITVLDGLRAEGFEPFFAQQARTRIEGKAEFTKHMLRLRHRGIVNEAGEAFEIVLVNANDGTSAYQMIPGFFRFVCANG
LMAGETFEEVKVRHSGNAIGEVIEGAYRVLEDAPRVADQVQRFKSIRLQDREREILAEAAHSLRFPATAEGKAAPIDPPA
LLRPRRSEDRATDLWTAFNVVQENTLRGGMRGRIETDSGFIRRQTVREVTGIDQSRALNRALWMLTERMAELKSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-61 48
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-59 48
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 3e-50 45
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 1e-50 45
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-50 45
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 9e-51 45
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-51 45
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 7e-51 44
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 7e-51 44
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 7e-51 44
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 6e-51 44
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 6e-51 44
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 5e-51 44
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-51 44
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 5e-54 44
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-51 44
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 1e-49 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_4386 YP_001170536.1 hypothetical protein VFG1676 Protein 2e-50 45
Rsph17025_4386 YP_001170536.1 hypothetical protein VFG0658 Protein 1e-51 44
Rsph17025_4386 YP_001170536.1 hypothetical protein VFG1615 Protein 6e-50 44
Rsph17025_4386 YP_001170536.1 hypothetical protein VFG1526 Protein 3e-51 44