Gene Information

Name : Rsph17025_4369 (Rsph17025_4369)
Accession : YP_001170519.1
Strain :
Genome accession: NC_009432
Putative virulence/resistance : Virulence
Product : type II secretion system protein E
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 13892 - 14920 bp
Length : 1029 bp
Strand : -
Note : PFAM: type II secretion system protein E

DNA sequence : 
ATGACCAGCGCCTCCCCTTCGCTCGCCCTCACCGCTTTCCTCGCGCCGATCCAGCCCTGGCTCGATCGCCCGGACATCCT
GGAGATCTGCGTCAACCGCCCCGGCGAGGTCTTCGTCGAGGATCCGCGGGGCTGGGAGCGGATCGCCCTGCCCGCCCTCA
GCTACGAGTTCCTGTCGGGGCTGGTCTCCACCATCAGCAGCTTTGCCCGGCAGAAGTTGAACGCCGAGGCGCCGCTGCTT
TCGGCCTCGCTGCCGGGCGGCGAGCGGGTTCAGGTGGTGCTGCCCCCGGCGGTGCCTGCGGGCACGATCAGCCTGACGAT
CCGGAAGCCCGCGCACCGCACCTTCTCGCTGGAGGCGCTGATCGGCACGGGCATGTTCGACGCGGTCGAAACCGACCCGG
AGGCACTAGGCGCCGAGGATGCGCAGCTAATCGCCTTGCACCGGGATCGGCGCTGGCCGGAGTTCCTCGCGGCCGCTGTG
GCGGCGAAGAAGAACATCCTGATTTCGGGCGCCACCGGCAGCGGCAAGACCACGCTGTCGAAGGCGCTGCTCCCGCTGAT
CCCCGAAACCGAGCGGCTCATCACCATCGAGGACACGCTGGAGCTGGAGCTGCCGCAGCCGAACGTGGTGCGGCTCATCT
ATTCCAAGGGCGGCCAGGGCGACGCGAAGGTGACGGCCCGCGACCTGCTGGAGGCGTCACTCCGGATGCGGCCCGACCGG
ATCTTCCTGCAGGAGCTGCGCGACGCCTCGGCCTTCTACTACCTGCGGAACGTGAACACCGGCCATTCCGGCTCGATCAC
CACGATCCATGCGGACTCGGCTCGGCTCGCCTTCGAGCAGCTGGCGCTGCTGGTCAAGGAGAGCGAGGCCGGCCGCGACC
TCTCGCGCGCCGAGATCAAGGCGATGCTGGTGCAGATGATCGACGTGGTCCTGCAGGTGAAGAAGGCCGCCCACGGCCGC
CGCGTCACCGAGGTCTGGTTCGATCCGCGCCGCAAGCTGGAGGCGTCCGGCCCGGAGGCCGCGCGATGA

Protein sequence : 
MTSASPSLALTAFLAPIQPWLDRPDILEICVNRPGEVFVEDPRGWERIALPALSYEFLSGLVSTISSFARQKLNAEAPLL
SASLPGGERVQVVLPPAVPAGTISLTIRKPAHRTFSLEALIGTGMFDAVETDPEALGAEDAQLIALHRDRRWPEFLAAAV
AAKKNILISGATGSGKTTLSKALLPLIPETERLITIEDTLELELPQPNVVRLIYSKGGQGDAKVTARDLLEASLRMRPDR
IFLQELRDASAFYYLRNVNTGHSGSITTIHADSARLAFEQLALLVKESEAGRDLSRAEIKAMLVQMIDVVLQVKKAAHGR
RVTEVWFDPRRKLEASGPEAAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 8e-73 50
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 3e-75 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_4369 YP_001170519.1 type II secretion system protein E VFG2240 Protein 1e-73 50
Rsph17025_4369 YP_001170519.1 type II secretion system protein E VFG0024 Protein 1e-51 44
Rsph17025_4369 YP_001170519.1 type II secretion system protein E VFG2218 Protein 2e-54 44