Gene Information

Name : Rsph17025_4326 (Rsph17025_4326)
Accession : YP_001170476.1
Strain :
Genome accession: NC_009431
Putative virulence/resistance : Virulence
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 83733 - 84401 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
GTGAAGGTTCTGGTGGTCGAGGATGACCGCGACCTTGCCGGCCAGATCGCGGCCGCGCTGGCGCAGGCGGGATATACGGT
GGAACTGGCGCATGACGGCGAGGAGGGCGAATTCCTCGGCGCGACCGAGACGGTCGGCGCCGCCGTGCTGGACCTCGGCC
TGCCGGGGATCGACGGGATCGAGGTGCTGCGGCGCTGGCGCGGCGCGGGACTGTCCTTTCCCGTGCTGATCCTGACCGCG
CGGGACGCATGGTCGGACAAGGTGGCGGGGTTCCGGGCCGGGGCTGACGACTACGTGCTGAAGCCCTTCCGCATGGAGGA
GGTGACGCTGCGCCTCTCCAGCCTCATCCGCCGCGCGGCGGGGCACGCGACGGCGGAACTGGCGGCGGGCGGCCTCGTGC
TGGACACGGCGACCGGGCTTGCCACGCTGGAGGGCATGCCGCTGCGGCTGACAGCCTTCGAGGCCCGGCTGTTGCGCTAC
CTGATGCTGAACAAGGGCCGTGTCGTCAGTCGGACGGAACTGTCCGAACACATGTATGACCGCGACGCCGACCGCGATTT
CCGCTCGCTGGAGGTGGTGATCGGCAGGCTGCGGAAGAAGATCGGCGAGGCGCGGGTGGAAACCAGGCGGGGCGAGGGCT
ATCGGCTGCTGCCCGGCGATCCGGCATGA

Protein sequence : 
MKVLVVEDDRDLAGQIAAALAQAGYTVELAHDGEEGEFLGATETVGAAVLDLGLPGIDGIEVLRRWRGAGLSFPVLILTA
RDAWSDKVAGFRAGADDYVLKPFRMEEVTLRLSSLIRRAAGHATAELAAGGLVLDTATGLATLEGMPLRLTAFEARLLRY
LMLNKGRVVSRTELSEHMYDRDADRDFRSLEVVIGRLRKKIGEARVETRRGEGYRLLPGDPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_4326 YP_001170476.1 cold-shock DNA-binding domain-containing protein NC_002516.2.879194.p Protein 6e-34 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_4326 YP_001170476.1 cold-shock DNA-binding domain-containing protein VFG1390 Protein 1e-20 42