|
Name : Rsph17025_4311 (Rsph17025_4311) Accession : YP_001170461.1 Strain : Genome accession: NC_009431 Putative virulence/resistance : Unknown Product : TOBE domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4644 EC number : - Position : 66926 - 68647 bp Length : 1722 bp Strand : + Note : PFAM: TOBE domain protein DNA sequence : ATGATCCGCGCGCTCGACATCCGGGCGGCACAGGGGGCCGAGCCGCTTCTCGCGGTCACGAAGATGATCGCCCAGGATGC TCCGGCCGGTCCCCGACCGACCACCTTCCTGCGCCGGTCGTCGCGCTGGCACCGCCATCTCCAGCGGCAGGAGGCGGGCA ATGATAGGCTCTGGCAGGTGGCGGTGCTGTTCCAGCTGCGCGATGCCTTCCGCTCCGGCGACATCTGGCTCGCGCATTCG CGCCGCTACGCCGACCTCAAGGAGGTGCTGGTGCCGATCGCGGCCGCGCAGGCCACGGCCCGCCTGGCGGTGCCCTTCGA TCCGGGGGATTGGCTTGCGGACCGGAAGGCGCGCATGGCCCAGGCGCTGAAGCGCCTCGCATCGGCCGCGAAGGCCGGGG CGATCCCCGGCGGCTCCATCGAGGACGGTACGCTGAAGATCGAGCGTCTGACCGCGGCCGTTCCGCCCGAGGCGGACGCA CTGGTGCTGGACCTCTACCGGCGTCTGCCCGAGGTGCGGATCACCGACCTCCTGCTCGAGGTGGACGCGGCGACCGGCTT CACCGACGCCTTCACCCACTTGCGCACCGGGGCGCCGTGCGCCGACCGGATCGGGCTGCTGAACGTGCTGCTTGCCGAGG GTCTGAACCTCGGCCTGAGCAAGATGGCCGAGGCCACCGACAGCCATGACTACTTCCAGCTCTCGCGCCTGTCGCGCTGG CATGTCGAAAGCGGCGCGATGAACCGCGCGCTCGCCATCGTGATTGAGGCGCAGGCTGCGCTGCCGATGGCGCGGATCTG GGGGGCCGGTCTCACCGCCTCCAGCGACGGCCAGTTCTTCCCCGCTGCAAGGCAGGGCGAGGCGATGAGCCTCGTGAACG CGAAATACGGCAGTGAGCCGGGGGTGAAGGCCTGCACCCATGTCTCGGACCAGTTCGGCCCCTTCGCCACTCAGGCCATC CCGGCGACAGTGAATGAGGCGCCTTACATCCTCGACGGCCTGCTGATGAACGAGCAGGGCCGCCGGATCCGCGAGAACTT TGCCGATACGGGCGGCTTCACCGATCATGTCTTTGCCATCACGGCGGCCCTCGGCTTCCGGTTCGTGCCGCGGATCCGCG ACCTGCCGTCGAAGCGGCTTTACGTCTTCGACCCGGCAAGCGTCCCGAAGGAGTTGAGGGGCCTCATCGGCGGCAAGGTC CGCGAGGGCACCATTACCAGCAACTGGCCCGACATCCTTCGCAGCGCAGCCACCATGGTGGCAGGCATCCTGCCGCCGAG CCAGCTCTTGCGGAAGTTCGCGGCCTATCCGCGCCAGCACGACCTGGCCGTGGCGCTGCGGGAAATCGGACGGGTCGAAC GGACGCTCTTCATCATCGACTGGCTGCTGGATGCCGACCTCCAGCGGCGCGCCCAGATCGGCCTCAACAAGGGCGAAGCG CACCACGCCCTGAAGAACGCCCTGCGCATCGGCCGCCAGGGCGAGATCCGCGACCGGACGGCGGAGGGCCAGCACTACCG GATGGCCGGCCTCAACCTGCTCGCCGCGATCATCATCTACTGGAACACCGCGCATCTCGGCCGGGCTGTCGCCGAGCGGC AGACCGCCGGGCTGGTCAGCCCGCCGGAACTCCTGGCCCACACGTCGCCGCTCGGCTGGGCGCATATCCTGCTGACCGGC GAGTACAGGTGGCCGAAGGCCGCCAGACATCTGGGCGGCTGA Protein sequence : MIRALDIRAAQGAEPLLAVTKMIAQDAPAGPRPTTFLRRSSRWHRHLQRQEAGNDRLWQVAVLFQLRDAFRSGDIWLAHS RRYADLKEVLVPIAAAQATARLAVPFDPGDWLADRKARMAQALKRLASAAKAGAIPGGSIEDGTLKIERLTAAVPPEADA LVLDLYRRLPEVRITDLLLEVDAATGFTDAFTHLRTGAPCADRIGLLNVLLAEGLNLGLSKMAEATDSHDYFQLSRLSRW HVESGAMNRALAIVIEAQAALPMARIWGAGLTASSDGQFFPAARQGEAMSLVNAKYGSEPGVKACTHVSDQFGPFATQAI PATVNEAPYILDGLLMNEQGRRIRENFADTGGFTDHVFAITAALGFRFVPRIRDLPSKRLYVFDPASVPKELRGLIGGKV REGTITSNWPDILRSAATMVAGILPPSQLLRKFAAYPRQHDLAVALREIGRVERTLFIIDWLLDADLQRRAQIGLNKGEA HHALKNALRIGRQGEIRDRTAEGQHYRMAGLNLLAAIIIYWNTAHLGRAVAERQTAGLVSPPELLAHTSPLGWAHILLTG EYRWPKAARHLGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpAC | YP_001800925.1 | transposase of Tn5393-like transposon, C-terminal fragment | Not tested | Not named | Protein | 2e-158 | 71 |
| tnpA | AGK07029.1 | transposase | Not tested | SGI1 | Protein | 7e-104 | 45 |
| tnpA | AGK07087.1 | transposase | Not tested | SGI1 | Protein | 7e-104 | 45 |
| tnpA | CAJ77068.1 | Transposase | Not tested | AbaR1 | Protein | 5e-104 | 44 |
