Gene Information

Name : Rsph17025_4090 (Rsph17025_4090)
Accession : YP_001170247.1
Strain :
Genome accession: NC_009430
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1118
EC number : -
Position : 140459 - 141178 bp
Length : 720 bp
Strand : +
Note : -

DNA sequence : 
ATGCATATCGAGATCGACGAGATCGCCAAGAGCTTCGGCGCCACCCCGGCGCTCCATCCCGTGAGCCTCTCGATCCCATC
GGGGGCGCTGATCGCGCTGCTCGGCCCCTCGGGCTCGGGCAAGACCACGCTCCTGCGCATCCTGGGTGGGCTCGAGTTTC
CCACCTCGGGCCGCGTGCTCTTCGACGGGCAGGACGCCACCGGGCTCACGGTGCAGGAGCGCCGCGCGGGCTTCGTCTTC
CAGAGCTACGCGCTTTTCCGGCACATGACGGTGTTCGAGAACGTGGCCTACGGCCTGCGCGCCCGCCCCCGCCGGACCCG
GCCGACGGCGCCCGAGATCGACCGCCGCGTGCATCGGCTGCTCGAGCTGATCCAGCTGCCCGACATCGGCGCGCGCTACC
CTGCGCAGCTGTCGGGCGGCCAGCGCCAGCGCGTCGCGCTGGCTCGCGCGCTGGCCATCGAGCCCCGGACGCTGCTTCTC
GACGAGCCCTTCGGCGCGCTCGACGCCCGCGTCCGCAGGGAGCTTCGCCAGGGCCTGCGCGAGATCCACGATGCGACGGG
CCTGACCACGGTCTTCGTCACCCACGACCAGGAGGAGGCGATGGAGCTGGCCGACTTTGTCGTGGTCATGTCGATGGGCC
GCATTGAGCAGGTCGGCCGCCCCGCCGACATCCGCGCCCGGCCCCGGACCGCCTTTGTCCGCGATTTCCTCGGGCCGTGA

Protein sequence : 
MHIEIDEIAKSFGATPALHPVSLSIPSGALIALLGPSGSGKTTLLRILGGLEFPTSGRVLFDGQDATGLTVQERRAGFVF
QSYALFRHMTVFENVAYGLRARPRRTRPTAPEIDRRVHRLLELIQLPDIGARYPAQLSGGQRQRVALARALAIEPRTLLL
DEPFGALDARVRRELRQGLREIHDATGLTTVFVTHDQEEAMELADFVVVMSMGRIEQVGRPADIRARPRTAFVRDFLGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-29 45
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-29 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_4090 YP_001170247.1 hypothetical protein BAC0600 Protein 1e-21 42
Rsph17025_4090 YP_001170247.1 hypothetical protein NC_008702.1.4606598. Protein 4e-14 41