Gene Information

Name : Rsph17025_3971 (Rsph17025_3971)
Accession : YP_001170130.1
Strain :
Genome accession: NC_009429
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 877193 - 877867 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGATCCTGCTTGCCGAGGACGACAGCCAGACCGCCGCCTACCTCCGGCAGGGCCTCTCCGCCGAGGGATACAGCGT
GGATCATGTGCCCGACGGCCGCGACGCGCTGGTGCAGGCGACGCTGCAACCCTACGACCTGCTGGTGATCGACCGGATGA
TGCCGGGGCTGGACGGGCTGTCGCTGGTCAAGGCCCTGCGCAGCGCGCAGGTCAAGGCCCCCATCCTGATCCTGACGGCG
ATGGGGGGCGTGACGGACCGGGTCGAGGGGCTTCAGGCGGGGGCCGACGACTACCTTGTGAAGCCCTTCGCCTTCTCGGA
GCTTTCGGCGCGGCTTGCGGCGCTTGCCCGGCGCCCGGCCCTTGCCGAGACCAGCCGCGACGTGCTGCGCGTGGGCGATC
TCACGCTCGACACGACGCGCCGCACCGCAACCCGCGGCGGCGCCGAGATCGACCTTCAGCCGCGCGAGTTCCGCCTGCTC
GAGCATCTGATGCGCTCGGCGGGGCGGGTGCAGACCCGGACGATGCTGCTCGAGGCGGTCTGGGACTTTCACTTCGATCC
CGGCACCAGCGTGGTCGAGACGCATATCAGCCGGCTGCGCGCCAAGATCGACCGGCCCTTCGAGAAACCGCTCCTCCATA
CGGTCCGCGGGGCGGGCTACATGCTGAAGGCATGA

Protein sequence : 
MKILLAEDDSQTAAYLRQGLSAEGYSVDHVPDGRDALVQATLQPYDLLVIDRMMPGLDGLSLVKALRSAQVKAPILILTA
MGGVTDRVEGLQAGADDYLVKPFAFSELSARLAALARRPALAETSRDVLRVGDLTLDTTRRTATRGGAEIDLQPREFRLL
EHLMRSAGRVQTRTMLLEAVWDFHFDPGTSVVETHISRLRAKIDRPFEKPLLHTVRGAGYMLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-37 46
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-36 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3971 YP_001170130.1 hypothetical protein BAC0083 Protein 8e-42 50
Rsph17025_3971 YP_001170130.1 hypothetical protein BAC0308 Protein 2e-37 46
Rsph17025_3971 YP_001170130.1 hypothetical protein BAC0638 Protein 1e-34 46
Rsph17025_3971 YP_001170130.1 hypothetical protein BAC0125 Protein 8e-38 44
Rsph17025_3971 YP_001170130.1 hypothetical protein BAC0347 Protein 1e-31 44
Rsph17025_3971 YP_001170130.1 hypothetical protein BAC0197 Protein 2e-36 44
Rsph17025_3971 YP_001170130.1 hypothetical protein BAC0111 Protein 4e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3971 YP_001170130.1 hypothetical protein VFG0596 Protein 3e-37 46
Rsph17025_3971 YP_001170130.1 hypothetical protein VFG1390 Protein 1e-30 45
Rsph17025_3971 YP_001170130.1 hypothetical protein VFG1389 Protein 3e-27 44