Gene Information

Name : Rsph17025_3956 (Rsph17025_3956)
Accession : YP_001170115.1
Strain :
Genome accession: NC_009429
Putative virulence/resistance : Resistance
Product : ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 861349 - 862038 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGAGACGATCCTTGCGCTGAGGGACGCGCGGCTGACGTTGGCAGGGAATGCGGGGCCGGTCGAGATCCTGAAGGG
GATCGACCTGGACATCCGGCGCGGCGAGACGCTGGGTCTTGTGGGGCCTTCGGGGTCGGGCAAGTCGTCTCTCCTGATGC
TGATGGGCGGGCTGGAACGCGCCACCGGCGGCTCGGTCATGGCCTTGGGCCAGGATCTGACGGCGATGGACGAGGACCAG
CTCGCGCGGTTCCGCCGGGGGAATATGGGGGTGGTCTTCCAGTCTTTCCACCTTATCCCCACGATGACGGCGCTGGAAAA
TGTGGCGGTGCCGCTGGAGCTTGCGGGCGTGCGCGACGCTTTCGAACGGGCCGAGGCCGAGTTGCGCGCGGTGGGGCTGG
GTCGGCGGATGGATCACTATCCCTCGCAGATGTCGGGGGGCGAGCAGCAGCGGGTGGCGCTCGCCCGCGCGGCGGCTCCG
CGGCCCGCGATCCTTCTGGCCGACGAGCCGACGGGCAACCTCGACGGGGTGAACGGGGCCGCGATCATGGATCTGCTCTT
CGGGCTGCGTGACCGGCACGGGGCGACGCTCGTGCTCGTGACCCACGCGCCGGAGCTTGCCGCGCGCTGTGACCGGGTGG
TGCGGCTGGCCGACGGGCTGGTCGCGGGCGAGGAGCGCAAGGCGGCATGA

Protein sequence :
MSETILALRDARLTLAGNAGPVEILKGIDLDIRRGETLGLVGPSGSGKSSLLMLMGGLERATGGSVMALGQDLTAMDEDQ
LARFRRGNMGVVFQSFHLIPTMTALENVAVPLELAGVRDAFERAEAELRAVGLGRRMDHYPSQMSGGEQQRVALARAAAP
RPAILLADEPTGNLDGVNGAAIMDLLFGLRDRHGATLVLVTHAPELAARCDRVVRLADGLVAGEERKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-16 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-16 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-16 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-14 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3956 YP_001170115.1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component-like protein NC_008702.1.4606598. Protein 8e-22 45
Rsph17025_3956 YP_001170115.1 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component-like protein NC_012469.1.7686878. Protein 4e-23 44