Gene Information

Name : Rsph17025_3725 (Rsph17025_3725)
Accession : YP_001169897.1
Strain :
Genome accession: NC_009429
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 625956 - 626309 bp
Length : 354 bp
Strand : -
Note : -

DNA sequence :
ATGATCATCCCCGGCCAGAGAATGCCGATCGTGATCGCGACCCGGCCGGTGGACTTTCGCTGTGGCCATGACGGGCTGGC
GGCCAAGGTCCAGAACGAACTGAAGCTCGATCCGCATTCCGGGCTGACGGTGATCTTCCGCTCCCGGCGCGGCGACCGGT
TGAAGATCCTCGTCTGGGACGGCAGTGGCCTGGTGCTGATCTACAAGCGGCTGGAGAGCGGTGCCTTCGTCTGGCCGAAG
GTGCAGGACGGGACGATGCGGCTGTCGCGGGCGCAGTTCGAGGCGCTTTTCGAAGGGCTCGATTGGCGGCGGGTGATGGC
GCAGCGGGTGCTTCCTCCGGCTGCGGCGAGTTGA

Protein sequence :
MIIPGQRMPIVIATRPVDFRCGHDGLAAKVQNELKLDPHSGLTVIFRSRRGDRLKILVWDGSGLVLIYKRLESGAFVWPK
VQDGTMRLSRAQFEALFEGLDWRRVMAQRVLPPAAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 8e-16 54
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 8e-16 54
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 2e-15 53
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 3e-18 50
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 5e-15 50
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 5e-15 50
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 5e-15 50
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-15 50
unnamed AAC31493.1 L0014 Not tested LEE Protein 3e-15 50
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 8e-15 50
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 3e-15 50
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 6e-15 50
unnamed AAL99258.1 unknown Not tested LEE Protein 3e-15 50
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 6e-15 50
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 3e-15 50
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-15 50
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 3e-15 50
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 3e-15 50
unnamed AAL08461.1 unknown Not tested SRL Protein 8e-15 49
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 5e-15 48
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 5e-15 48
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 3e-15 47
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 3e-15 47
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 4e-15 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3725 YP_001169897.1 hypothetical protein VFG1665 Protein 8e-16 53
Rsph17025_3725 YP_001169897.1 hypothetical protein VFG1709 Protein 1e-15 50
Rsph17025_3725 YP_001169897.1 hypothetical protein VFG0792 Protein 1e-15 50
Rsph17025_3725 YP_001169897.1 hypothetical protein VFG1698 Protein 2e-15 50
Rsph17025_3725 YP_001169897.1 hypothetical protein VFG1052 Protein 3e-15 49
Rsph17025_3725 YP_001169897.1 hypothetical protein VFG1737 Protein 1e-15 46