Gene Information

Name : Rsph17025_3680 (Rsph17025_3680)
Accession : YP_001169853.1
Strain :
Genome accession: NC_009429
Putative virulence/resistance : Virulence
Product : histidine kinase A domain-containing protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 573419 - 574081 bp
Length : 663 bp
Strand : +
Note : PFAM: histidine kinase, HAMP region domain protein; histidine kinase A domain protein

DNA sequence : 
ATGCGGATACTCGTCGTCGAAGATGACGCGGTGCTCTCGGACGGGCTGCGGGCGGGGCTCAGGATCGCCGGCTTCAGCCC
CGAGACGGTCGCCAGTCTCGAGGATGCACGCGCAGCCCTTCTCGCGGGCCGGTTCGATGCGATGGTGCTGGATCTCATGC
TGCCGGACGGCTCGGGGCTGGACCTTCTGGTCGAGGTGCGATCGGCCGGGCTTGCGGTTCCGGTGCTCGTGCTGACCGCG
CGGGACCGGCTCGACGACAGGGTGCGCGGGCTCGACCTCGGGGCCGACGACTACCTCGGCAAGCCGTTCGAGCTGGAAGA
GCTGGCCGCGCGCCTCAGGGCCCTTGGCCGCCGCCCCGCCGCGCTGTCCGAGACCCGGCCCGCGTGGAACGGTGTCACGC
TCGATCTCGCGGCCCTCGTGGCCAGCCGGGCGGATGGGCCGGTCCCCCTTTCGCCGAGGGAATTCTCGGTGCTGCGCGCG
CTGATGGACCGACCGCGCGCGGTCCTCAGCAAGGCCCAGCTCGAGGAACAGCTCTACGGCTGGCAGGAAGAGATCGAAAG
CAACGCGGTCGAGGTTCATATCCACAAGCTGCGCTCGAAGCTCGGCCATGATTTCATCGAGACGGTGCGGGGCGCGGGCT
ATCGGCTGGCGGAGGCCCGATGA

Protein sequence : 
MRILVVEDDAVLSDGLRAGLRIAGFSPETVASLEDARAALLAGRFDAMVLDLMLPDGSGLDLLVEVRSAGLAVPVLVLTA
RDRLDDRVRGLDLGADDYLGKPFELEELAARLRALGRRPAALSETRPAWNGVTLDLAALVASRADGPVPLSPREFSVLRA
LMDRPRAVLSKAQLEEQLYGWQEEIESNAVEVHIHKLRSKLGHDFIETVRGAGYRLAEAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-20 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3680 YP_001169853.1 histidine kinase A domain-containing protein BAC0487 Protein 8e-23 43
Rsph17025_3680 YP_001169853.1 histidine kinase A domain-containing protein NC_002516.2.879194.p Protein 4e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3680 YP_001169853.1 histidine kinase A domain-containing protein VFG0473 Protein 2e-26 43
Rsph17025_3680 YP_001169853.1 histidine kinase A domain-containing protein VFG1390 Protein 3e-17 41