Gene Information

Name : Rsph17025_3334 (Rsph17025_3334)
Accession : YP_001169520.1
Strain :
Genome accession: NC_009429
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 210951 - 211754 bp
Length : 804 bp
Strand : +
Note : -

DNA sequence :
ATGATCACGAACACGCTGGTGGCACGCGGCATCCAGGCCGGATACGGCGAGCGCCCCGTGCTGCGGGGGCTCGACCTCAC
CGTGCCCCCGGGACGGATCACCGCCATCGTGGGCGCCAACGCCTGCGGCAAGTCCACGCTGCTGCGGACGATGTCGCGGC
TGCTGGCGCCCGCGGCCGGTCAGGTGCTGCTCGACGGCAAGTCGGTGCACCGCATCCCCCCGCGGGAGCTGGCGCGGAAG
ATGGGCCTCCTGCCGCAGGCGCCGCTGGCGCCCGACGGGATCACGGTCCTCGACCTCGTGAGCCGTGGGCGGCATCCGCA
CCAGGGGATGCTCTCGCGCTGGAGCGCCGGCGACGACGAGGCCGTGGCCGCCGCAATGGAGGCCACGGGCACGGCCGATC
TGGCCGAGCGCGCGGTCGATGAGCTTTCGGGGGGCCAGCGCCAGCGCGTCTGGATCGCGGTGGCGCTGGCGCAGCAGACG
GGGCTTCTGCTGCTCGACGAGCCGACGACCTTCCTCGACATCGCCCACCAGATCGACGTGCTGGACCTTCTGACCGACCT
GAACCGCGCGCAGGGCACGACCATCGTGATGGTGCTCCACGACCTCAACCTCGCCGCGCGCTACGCCGATCTGCTGGTGG
CGCTGGCCGGCGGACAGGTCCATGCCGCCGGTCCGCCGGACGAGGTGCTGACCGAGGCGATGGTCGCAGCCGTCTTCGGC
CTGTCCTGCCGCACGATGGCCGACCCGATCACGGGCCGGCCGATGATGCTGCCGATCGGTCGCCACGGTCACGCGGGCCG
TTAG

Protein sequence :
MITNTLVARGIQAGYGERPVLRGLDLTVPPGRITAIVGANACGKSTLLRTMSRLLAPAAGQVLLDGKSVHRIPPRELARK
MGLLPQAPLAPDGITVLDLVSRGRHPHQGMLSRWSAGDDEAVAAAMEATGTADLAERAVDELSGGQRQRVWIAVALAQQT
GLLLLDEPTTFLDIAHQIDVLDLLTDLNRAQGTTIVMVLHDLNLAARYADLLVALAGGQVHAAGPPDEVLTEAMVAAVFG
LSCRTMADPITGRPMMLPIGRHGHAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-60 55
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-51 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 5e-61 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 5e-61 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-51 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-49 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-49 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-49 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-49 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 41
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3334 YP_001169520.1 hypothetical protein BAC0164 Protein 6e-51 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3334 YP_001169520.1 hypothetical protein VFG0925 Protein 1e-62 53
Rsph17025_3334 YP_001169520.1 hypothetical protein VFG1042 Protein 5e-51 49