Gene Information

Name : Rsph17025_3332 (Rsph17025_3332)
Accession : YP_001169518.1
Strain :
Genome accession: NC_009429
Putative virulence/resistance : Virulence
Product : transport system permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 208874 - 209914 bp
Length : 1041 bp
Strand : +
Note : PFAM: transport system permease protein

DNA sequence : 
ATGAGCCGCGGATCGCCATCCCCCACGGCGGTTGCGGCGCTGCGGCGGTCGGGCCGGGGCCGGCTCGTCTGGCTGGGCCT
GTTGGCCGCGGGGCTGGTTCTGGCCTGCGCGCTGTCGGTGACGGTGGGCACGCGCGGGGTGAACTGGCCGGACATCCTGG
GAGGGCTCGCCGGACGAACGGTGACGATCGGCGAGGCCGTCGTGGCGGTTCGGGTGCCGCGCACCCTGCTGGCCGTGCTG
GCCGGAGCGGCCCTTGGCCTCTCGGGGGCCGTCATGCAGGGGATCACGCGCAGCCCGCTCGCCGATCCCGGCATCCTGGG
CGTCAACGCCGGCGCGGCGATGGCCGTGGTGCTCGGGATGGCGTGGTTCGGGATGGAGACGCTTTCGGCCCATCTGTGGA
GCGCGATCCTGGGCGCGGCCGCCGCGGCCTGTTTCGTCTATGCGGTGGGATCGCTCGGCCGCGGCGGCGCCACACCGCTC
AAGCTGGCGCTGGCGGGGGCCGCCACCACCATTGCGGTCTCGTCGCTGACGGTGGCGATCATCCTGCCGCGGGGCGACAT
CGCGGGCAGCGTGCAGTCCTGGCAGGTCGGCGGCGTGGGCGGCGCAAGCGCCGATGCGCTTGCGGCCATGCTGCCCTTCC
TTGTCGCGGGCGGCGCCATCAGCCTCTGGTCGGCGCGCAACCTGAACATGCTCGCGCTCGGGGACGATGCGGCGGCCGGG
CTCGGGGTTCCGGTGGCGCTCAGCCGGTTGATCGCGGCCGCGGGGGCGGTCCTGCTCTGTGGCGCCACAACGGCGATCTG
CGGGCCGATCGGCTTCGTCGGGCTGGTCGTGCCCCATGTCGGCCGGCTTCTGGTCGGCGTCGATCACCGCTGGCTGCTGC
CGTTCGCGGCCCTGTCCGGGGCGCTTCTGCTGACCCTGGCCGATGTGCTGGGCCGCATCGCGGCGCGGCCCGGAGAGCTG
GACGTCGGCATCGTGACCGCCTTTGCCGGGGCGCCGGTCTTCATCTGGATTGTCCGGCGCCGGAGGATCCGCGAGCTGTG
A

Protein sequence : 
MSRGSPSPTAVAALRRSGRGRLVWLGLLAAGLVLACALSVTVGTRGVNWPDILGGLAGRTVTIGEAVVAVRVPRTLLAVL
AGAALGLSGAVMQGITRSPLADPGILGVNAGAAMAVVLGMAWFGMETLSAHLWSAILGAAAAACFVYAVGSLGRGGATPL
KLALAGAATTIAVSSLTVAIILPRGDIAGSVQSWQVGGVGGASADALAAMLPFLVAGGAISLWSARNLNMLALGDDAAAG
LGVPVALSRLIAAAGAVLLCGATTAICGPIGFVGLVVPHVGRLLVGVDHRWLLPFAALSGALLLTLADVLGRIAARPGEL
DVGIVTAFAGAPVFIWIVRRRRIREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 3e-21 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 3e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3332 YP_001169518.1 transport system permease protein VFG0926 Protein 7e-18 44