Gene Information

Name : Rsph17025_0889 (Rsph17025_0889)
Accession : YP_001167097.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 906545 - 908563 bp
Length : 2019 bp
Strand : -
Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo

DNA sequence :
GTGGACATACAGAGCCTGCGCGAGCAGCATCCCGATCACTGGAAGAAAGCCTGCGCCATCCGCGCGCTGACGCTCGACGC
CGTGGCGGCGGCCAATTCCGGCCATTCCGGCATGCCGATGGGCATGGCGGACGTCGCGACCGTCCTCTACGAGAAGCACA
TGGTCTTCGACGCGCAGTCCCCCGACTGGCCGAACCGCGACCGGTTCGTGCTGTCCGCGGGTCACGGCTCGATGCTGGTC
TATTCGCTGCTTCACCTGACCGGCGACCCCGAGTTCCCGATCGAGCAGATCAGGAACTTCCGCCAGTGGGGCTCCCGAAC
CGCTGGCCACCCCGAGAACTTCCTCGCCAAGGGGATCGAGACCACGACCGGCCCGCTGGGCCAGGGCCTGGCGATGGCCG
TGGGTCTCGCGATGGCCGAAGAGTCGCTCCGCGCCCGCTGGGGGGCGAAGATCATCGACCACTACACCTACTGCATCGCC
GGCGACGGCTGCCTGATGGAGGGGGTGAGCCAGGAGGCCATCGGCCTCGCCGGCCGGCACGAACTGTCGCGCCTGATCGT
GATGTGGGACAACAACGGCATCACCATCGACGGCAAGGTGGCGCTGTCGGACCGCACCGACCAGAAGGCGCGCTTCGCCG
CCGCGGGCTGGGACGTGTTCGAATGCGACGGCCATGATCCCGCCGACATCGACCGCGCGCTGACCGAAGCCAAGGCCTCG
AAGGGCCCGGCCTTCATCGCCTGCACCACGCATATCGCGCTCGGCTCTTCGGCTCAGGACACCTCCAAGGGTCACGGCGC
GCTGACCGATGCCAAGCTGATCACCGACACCAAGGCCGCCTATGGCTGGACCGCCGGGGCCTTCGAGATCCCGGCCGACA
TCAAGACGGCCTGGGAGACCATCGGCTCGCGCGGAGCCGAGGCCCGCAAGGCATGGGACGAGCGGTTCGCCGCCCTCTCG
GACAGCAAGCGCGCCCTCTTCCAGCAGCAGTTCTCCTGCGAGCCGCCGAAAAAGCTCGCCGCCGCGATCCGCGCCGTGAA
GAAGGACGCGGTCGAGAAGATGCCGAAGGTCGCGACCCGCCGCGCCTCGGAGATGGTGCTGGAAGCGGTCAATCCGATCA
TGACCGAGACCATCGGCGGCTCGGCCGACCTGACCGGCTCGAACAACACCAAGACGGCCGACCTCGGCGTGTTCGACCCG
ATCAACCGCAAGGGCCGCTACGTCTATTACGGCATCCGCGAGCACGGCATGGCCGCGGCGATGAACGGCATGGCGCTGCA
CGGCGGCCTGCGCCCCTACGGCGGCACCTTCATGTGCTTTGCCGACTACTGCCGCCCCGCCGTGCGCCTCTCGGCGCTGA
TGCACATGCCGGTGGTCTATGTCTTCACCCATGACTCGATCGGTCTGGGCGAGGACGGGCCGACCCACCAGCCGGTCGAG
CATCTGGCCATGCTGCGCGCGACGCCGAACATGCTGGTGTTCCGCCCGGCCGACCTGACCGAGACCGCCGAGGCCTGGGA
GATCGCGCTCTCCGAAAAGGCCACGCCCTCGGTGCTGGCGCTGTCGCGGCAGAACCTGCCGGCGGTGCGCAAGACCCACA
CCAACAAGAACCTCGTCGCGCAGGGCGCCTATGTGCTCGAAGAGGCTACGGCCAAGCGTCAGGTGATCCTGATCGCCTCG
GGCTCCGAGGTCGAGGTGGCGCTGAAGGCCCGCGAGGCGCTCGAGGCCGAGGGCATCGGCACCCGCGTCGTCTCGATGCC
CTGCATGGAGCTGTTCGCCCGGCAGGACGAGGCCTACCGCCGCAAGGTTCTGCCGGCGGGCGCCGTCCGCATCGCCATCG
AGGCGGGTGTCCGCATGGGCTGGGACCGCTGGCTTCTGGGCGAGCGCGGCCGCGAGGGCAAGGACGGCTTCATCGGCATG
TCGGGCTTCGGCGCCTCGGCCCCGGCCGAGCGGCTGTTCCAGGAGTTCGGCATCACGCCCGAGGCGACCGTCGCCAAGGC
CAAGGCCCTGCTCGGCTGA

Protein sequence :
MDIQSLREQHPDHWKKACAIRALTLDAVAAANSGHSGMPMGMADVATVLYEKHMVFDAQSPDWPNRDRFVLSAGHGSMLV
YSLLHLTGDPEFPIEQIRNFRQWGSRTAGHPENFLAKGIETTTGPLGQGLAMAVGLAMAEESLRARWGAKIIDHYTYCIA
GDGCLMEGVSQEAIGLAGRHELSRLIVMWDNNGITIDGKVALSDRTDQKARFAAAGWDVFECDGHDPADIDRALTEAKAS
KGPAFIACTTHIALGSSAQDTSKGHGALTDAKLITDTKAAYGWTAGAFEIPADIKTAWETIGSRGAEARKAWDERFAALS
DSKRALFQQQFSCEPPKKLAAAIRAVKKDAVEKMPKVATRRASEMVLEAVNPIMTETIGGSADLTGSNNTKTADLGVFDP
INRKGRYVYYGIREHGMAAAMNGMALHGGLRPYGGTFMCFADYCRPAVRLSALMHMPVVYVFTHDSIGLGEDGPTHQPVE
HLAMLRATPNMLVFRPADLTETAEAWEIALSEKATPSVLALSRQNLPAVRKTHTNKNLVAQGAYVLEEATAKRQVILIAS
GSEVEVALKAREALEAEGIGTRVVSMPCMELFARQDEAYRRKVLPAGAVRIAIEAGVRMGWDRWLLGERGREGKDGFIGM
SGFGASAPAERLFQEFGITPEATVAKAKALLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 3e-126 47
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 1e-126 46