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Name : Rsph17025_0740 (Rsph17025_0740) Accession : YP_001166951.1 Strain : Rhodobacter sphaeroides ATCC 17025 Genome accession: NC_009428 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 750857 - 751690 bp Length : 834 bp Strand : - Note : PFAM: Integrase, catalytic region DNA sequence : GTGAAGGCCGTGGCAGAAACCCTGGGCGTGGCCCGTTCCAACCTGATAGACCGGCTGAAGGGCAGGACGAAGCCGCGTCG GTGCTATCAGAAGGCGCAAGACGCAGTGGTGGTGCCAAGGATCACGGCGCTCGTGTCAGCGCGACCGACCTACGGCTACC GGCGGATCACCGCAATCCTGAACCGCCAGTTGCGCTCGGAAGGCTTGGCGCCGGTCAATCACAAGCGGGTCTACCGGATC ATGCAGGCCCATAACCTGCTGCTGGCGCGAAAGTATTCCGAACGCCCCGAGCATGTTCACGACGGCAAGGTGATCGTCAT GCGCTCCAACCTGCGCTGGTGCTCGGACGGGTTCGAGTTCACCTGCTGGAACGGGGACATCGTCCGCGGCGCCTTCATCA TCGATGCCCATGATCGGGAAATCATCGCATGGCGCGCCGTGGTCAACGCCGGGATCAGCGGCTCCGACATCCGAGACATC ATGCTCGAAGCCGTCGAACGCCGCTTCGGCGCATACCGCGCCCCATCGGTTATCGAGATGCTCTCCGACAACGGACCGCC CTACATCGCGAAGGACACCCAGATCTTCGCCCGCCAACTCGGTCTGAAGCCCTGCTTCACCCCTGTCCAGAGCCCGCAGA GCAACGGCATCTCGGAGGCTTTCGTGAAGACGCTGAAGCGCGACTACGTCCAGGTGACGCCATTGCCGGACGCACAGACA GCTCTCGGATTGATCGGCGCCTGGATGGAGGACTGCAACGAAAACCACCCGCATTCAGGGCTGAAAATGCGCTCGCCCCG CGAGTTCATCGCAGCCCAAACCGCAACCGCCTGA Protein sequence : MKAVAETLGVARSNLIDRLKGRTKPRRCYQKAQDAVVVPRITALVSARPTYGYRRITAILNRQLRSEGLAPVNHKRVYRI MQAHNLLLARKYSERPEHVHDGKVIVMRSNLRWCSDGFEFTCWNGDIVRGAFIIDAHDREIIAWRAVVNAGISGSDIRDI MLEAVERRFGAYRAPSVIEMLSDNGPPYIAKDTQIFARQLGLKPCFTPVQSPQSNGISEAFVKTLKRDYVQVTPLPDAQT ALGLIGAWMEDCNENHPHSGLKMRSPREFIAAQTATA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 1e-49 | 49 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 3e-50 | 49 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 4e-49 | 48 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 4e-49 | 48 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 7e-56 | 48 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 3e-50 | 47 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 7e-51 | 47 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 2e-49 | 46 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 1e-49 | 46 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 7e-50 | 46 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 1e-49 | 46 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 1e-49 | 46 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 1e-48 | 45 |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 4e-40 | 44 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 6e-42 | 44 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 5e-42 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17025_0740 | YP_001166951.1 | integrase catalytic subunit | VFG0649 | Protein | 2e-49 | 48 |
| Rsph17025_0740 | YP_001166951.1 | integrase catalytic subunit | VFG1732 | Protein | 1e-50 | 47 |
| Rsph17025_0740 | YP_001166951.1 | integrase catalytic subunit | VFG0621 | Protein | 5e-50 | 46 |
| Rsph17025_0740 | YP_001166951.1 | integrase catalytic subunit | VFG0608 | Protein | 5e-50 | 46 |
