Gene Information

Name : Rsph17025_0733 (Rsph17025_0733)
Accession : YP_001166944.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 745857 - 747161 bp
Length : 1305 bp
Strand : +
Note : PFAM: transposase IS66

DNA sequence :
ATGATCTGGGCTTCGGTGAAACGGCTCTTCTTCATCGGAATCTCCTCGTCCATCTTGCCGAGAAAATTCTACGTTCGCAT
CCCTCTAACCTTGGGGAGGATTACCAAGCGGCAGGCCTTCGGCAAGGGCTCGGAGAAGATCGCCCGTGAGATCGAGCAGT
TGGAATTCGCGCTCGAGAGCCTGCAGGTGGCTCAGGCCGAGGTTGCGCCGCCGCCCGAGCCGGAAAGCGTCGAGACCACA
CTGGTCTCCGCGGCGCAGGATGAACAGGACGATGGGGATGCCCCGGAGAAGGCGCCGCGCCGCCGTCCGCGGGTGTCGCC
CGACACGCCGCGCGAGCGCCGCGAACTCGATCCCGGCGACACCTGCCCCGACTGCGGCGGCGCCCTGCGCCTTGTCGGCG
AGGACGTTAGCCAGATCCTCGACATGATCGCGGCCCGGCTGAAGCTGATCGAGGTGGCGCGGCCGAAGAAGTCCTGCCGG
TGCTGTGAGCGCATGGTGCAATGCCCGGCGCCGGCCCGGCCGATCCCGGGCAGCCTCGCCGGTCCGAGCCTGCTGGCCAT
GATCGTGTTCGAAAAGTTCGGCCAGCATCAGCCGTTGAACCGTCAGGCCGAGCGCTATGCCGGCGAGGGCGTGGACCCGA
GCCTCTCGACGCTCGCCGACCAGATTGGCGCGGTGGCGGAACTGCTGAAGCCGCTCCATGACCTGATCGAGGCGCATGTT
CGCGCCGCTTCCCGCCTGCACGGCGACGACACCACGGTGCCACTGCTCGCCCGGGGCGGCACGAAGACGGCGAGGCTCTG
GACCTATGTCCGCGACGACCGCCCCTTCGGCGGCACCGCTCCGCCCGCCGTGGTCTTCCGCTTCTCGCGCGACCGGGCCG
GGGAGCATCCGGCCGAGCATCTGACGGGGTGGAAGGGCATCCTCCAGGCCGACGCGTATGCGGGCTACAACCCGCTCTAT
CGCGGCGATCGCAAGCCGGGACCGGTCCTGCCTGCGCTCTGCTGGAGCCACGCCCGGCGCAAGTTCTTCGAACTGGCCGA
TGCCGAGGGGAACATCCGCAAGGGGAAGGACCCCAAGGAAATCTCGCCAATCGCCTTCGAGGCGGTCAGGCGCATCGACG
CGCTCTTCGAGATCGAGCGCGACCTGAGCAGCGAAGCCCCCGCCGCCCGTCTCGCCGCGCGCAGGGCGCGGTCGGCCCCG
CTGGTCGAGGACCTCGAACGCTGGCTCCGCGCCGAACGCGCGCTTCTGTCGAAGCACGCCAAGGTGGCCAAGGCGATCGA
TTATCTGCTGTCGCCCGATCATTAG

Protein sequence :
MIWASVKRLFFIGISSSILPRKFYVRIPLTLGRITKRQAFGKGSEKIAREIEQLEFALESLQVAQAEVAPPPEPESVETT
LVSAAQDEQDDGDAPEKAPRRRPRVSPDTPRERRELDPGDTCPDCGGALRLVGEDVSQILDMIAARLKLIEVARPKKSCR
CCERMVQCPAPARPIPGSLAGPSLLAMIVFEKFGQHQPLNRQAERYAGEGVDPSLSTLADQIGAVAELLKPLHDLIEAHV
RAASRLHGDDTTVPLLARGGTKTARLWTYVRDDRPFGGTAPPAVVFRFSRDRAGEHPAEHLTGWKGILQADAYAGYNPLY
RGDRKPGPVLPALCWSHARRKFFELADAEGNIRKGKDPKEISPIAFEAVRRIDALFEIERDLSSEAPAARLAARRARSAP
LVEDLERWLRAERALLSKHAKVAKAIDYLLSPDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-47 42
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 4e-50 41
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-50 41
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_0733 YP_001166944.1 transposase IS66 VFG1513 Protein 2e-47 42
Rsph17025_0733 YP_001166944.1 transposase IS66 VFG1516 Protein 2e-50 41