|
Name : Rsph17025_0529 (Rsph17025_0529) Accession : YP_001166740.1 Strain : Rhodobacter sphaeroides ATCC 17025 Genome accession: NC_009428 Putative virulence/resistance : Unknown Product : ABC transporter-like protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 530537 - 532138 bp Length : 1602 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase DNA sequence : ATGAGCGTTCTCGAGGTGAAAGAGCTGACCGTCCGCTTCCGGCAGGACGGCCGCGTGGTCGAGGCTGTCAAGCGCGTCAG CTTCTCGGTCGGGCGCGGCGAGACGGTGGCGCTGGTGGGGGAAAGCGGCTCGGGCAAGTCGGTGACGGCGCTGTCCACCG TGTCGCTTCTGCCCGACAGCGCCGAGGTCTCGGGCTCCGTCCGCTATGGCGAGCGCGAGATGGTGGGCGCGCCGGAACCC GCGCTGCGCAAGGTGCGCGGCAACGACATCAGCTTCATCTTCCAGGAGCCGATGACCTCGCTGAACCCGCTGCACACGAT CGAGCGGCAGATCGGCGAGAGCCTCGCCCTGCATCAGGGCCTGACCGGCGAGAAGGCGCGGGCGCGCATCCTCGACCTGC TGGTGAAGGTGGGCATCCGCGAGCCCGAAAGCCGGCTGGGCGCCTATCCGCACCAGTTGTCGGGCGGGCAGCGGCAGCGG GTGATGATCGCGATGGCGCTGGCCAACGGCCCCGACCTGCTGGTCGCGGACGAGCCGACCACCGCGCTCGACGTGACGAT CCAGGCGCAGATCCTGGACCTGCTGGCCGAGCTGAAGGCGAAGGAGGGGCTGAGCCTTCTGTTCATCACCCACGATCTGG GCGTGGTGCGGCGCATCGCCGACCGGGTCTGCGTGATGCAGGGCGGCGAGATCGTCGAGCAGGGGCCGGCGGCGCAGATC TTCGCGGCGCCGCAGCATCCCTACACGCAGAAGCTGCTGGCGGCCGAGCCGAAGGGCCGGCCCGATCCGGTGCCGGCCGG GGCGGCCGAGATCGTGCGCACCCGCGACCTGCGCATCTGGTTCCCGATCCAGCGCGGCATCCTGCGGCGCACCGTCGGCC ATGTGAAGGCGGTGAACGCCGCCAGCCTCTCGATCCGCGAGGGCGAGACGCTGGGCGTGGTGGGCGAGAGCGGCTCGGGC AAGACGACGCTGGCGCTGGGCATCCTCAGGCTGATCGAGTCGCAGGGGCCGATCACCTTCCTCGGGCAGGAGATCCAGTC GCGCCGGGCGCGGGCGCTGCGCGAGATCCGGCGCGACATGCAGATCGTGTTCCAGGATCCCTATGGCAGCCTGTCGCCAC GCATGACGGTCGAGCAGATCATCGCCGAGGGTCTGGGCGTGCATGGCGTGGAGAAGGGCCGCGACCGCCGCGACATGGTG GGTGAGATCATGACCGAGGTCGGCCTCGACCCCGCCGCGATGGGCCGCTATCCGCACGAATTCTCGGGCGGGCAGCGCCA GCGCATCGCCATCGCCCGGGCGATGATCCTGCGGCCGAAGTTCGTGGTGCTGGACGAGCCGACGAGCGCGCTCGACATGA CCGTGCAGGTCCAGATCGTGGAGCTTCTGCGCGCGCTGCAGCGCAAGTGGGGGCTGGCCTATCTGTTCATCAGCCACGAC CTGAGGGTGGTGCGGGCCTTGTCGCACAAGGTTCTGGTCATGAAGGACGGCGATGTTGTGGAGGCCGGCGAGGGCGACGA GGTCTTCGAGCGGCCCCGGACCGACTACACCCGCACCCTGCTGGCCGCCGCCTTCGGAGGGCCGGTGCGCCAGCCCGCCT GA Protein sequence : MSVLEVKELTVRFRQDGRVVEAVKRVSFSVGRGETVALVGESGSGKSVTALSTVSLLPDSAEVSGSVRYGEREMVGAPEP ALRKVRGNDISFIFQEPMTSLNPLHTIERQIGESLALHQGLTGEKARARILDLLVKVGIREPESRLGAYPHQLSGGQRQR VMIAMALANGPDLLVADEPTTALDVTIQAQILDLLAELKAKEGLSLLFITHDLGVVRRIADRVCVMQGGEIVEQGPAAQI FAAPQHPYTQKLLAAEPKGRPDPVPAGAAEIVRTRDLRIWFPIQRGILRRTVGHVKAVNAASLSIREGETLGVVGESGSG KTTLALGILRLIESQGPITFLGQEIQSRRARALREIRRDMQIVFQDPYGSLSPRMTVEQIIAEGLGVHGVEKGRDRRDMV GEIMTEVGLDPAAMGRYPHEFSGGQRQRIAIARAMILRPKFVVLDEPTSALDMTVQVQIVELLRALQRKWGLAYLFISHD LRVVRALSHKVLVMKDGDVVEAGEGDEVFERPRTDYTRTLLAAAFGGPVRQPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-89 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-89 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-89 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-89 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-95 | 42 |
