Gene Information

Name : Rsph17025_3022 (Rsph17025_3022)
Accession : YP_001169211.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3093489 - 3094178 bp
Length : 690 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGCGGACGGTGCTGGTGAGCGATCCTTCGGAAAGACTGCTCTCGCTTGAGGGAGTGCGGAAAAGCTACGCCACGGGCGA
GGGGCCGGTTCAGGTCCTGGCCGGGGTGGACATGACGCTCGCGCCGGGCGAAAGCCTTGCGCTGACGGGTGAATCCGGCA
GCGGCAAGAGCACGCTCCTTCACCTCGCGGCCGGGCTCGATTCGGCCGATGAGGGCCGGATCGTCGTGGCCGGCCACGAC
ATTTCGCAGGCCGGCGACGCCGAGCGCGCCCGGCTGCGGCGCGGCACCGTGGGGCTCGTCTTCCAGCAGTTCAACCTGAT
CCCCTCGCTCGACGTGGCCGCGAACCTGGCCTTTCAGGCGAGGCTCGCTGGGCGGCACGATCCCGAGTGGCAGGCCGAGC
TGGCCGATGCGCTCGGTCTGACGGCCTGCCTCCACCGCTACCCCGAACAGCTTTCGGGCGGACAGCAGCAGCGGGTGGCC
ATCGGCCGCACGCTGGCGGCCCGGCCGCGCCTCGTTCTGGCCGACGAGCCGACGGGCAATCTCGACGAGGCGACCGGCGA
CGCGGTGATGGCGCTTTTCCTGCGCCTCGTCAGCCAGACCGGAGCGGGGCTTCTGATGGTCACCCATTCCACCCGGCTCG
CGGGGCGGCTCCACGGCCGGTTGCAGCTGTCGGCGGGTCGGGTGGCATGA

Protein sequence : 
MRTVLVSDPSERLLSLEGVRKSYATGEGPVQVLAGVDMTLAPGESLALTGESGSGKSTLLHLAAGLDSADEGRIVVAGHD
ISQAGDAERARLRRGTVGLVFQQFNLIPSLDVAANLAFQARLAGRHDPEWQAELADALGLTACLHRYPEQLSGGQQQRVA
IGRTLAARPRLVLADEPTGNLDEATGDAVMALFLRLVSQTGAGLLMVTHSTRLAGRLHGRLQLSAGRVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-38 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-37 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-37 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_3022 YP_001169211.1 ABC transporter-like protein CP001581.1.gene798.p Protein 2e-37 42
Rsph17025_3022 YP_001169211.1 ABC transporter-like protein NC_008702.1.4606598. Protein 5e-30 41