Gene Information

Name : fliP (Rsph17025_2742)
Accession : YP_001168934.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : 3.1.1.3
Position : 2784392 - 2785102 bp
Length : 711 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGTTCATGCCTCTTCTGGTGCTTGCCGCCACGGCTGCACCGGCGGCGGGGCAGTCCCTCTCGGTGGACTTTGGCGACGG
AAGCTCTCTCACCACGCGCAGCGTCCAGCTCATCGTGCTCATCACGCTTCTCAGCCTCGTGCCCGCCCTGGGGATGATGA
TCACCTGCTTTCCCTTCATCGTGACGGTGCTCTCGATCCTGCGTCAGGCGATCGGGCTGCAGCAGGCGCCGCCCAACATG
CTCATTGTCAGTCTCGCGCTCTTTCTGACCTGGTACATCATGGACCCGGTCTTCACCGAGGCCTGGACCCGGGGCATCGA
GCCGCTCACCCGAAACGAGATCGACATTCAGCAGGCGCTCGTCCTGGCCAGCGCCCCGTTCCGGGGCTTCATGGCCGCGC
GCCTCGACCTCGAGACCTTCTCGACGCTTCAGGCGCTGAGGCCGGGCGAGATCTCGCCGCCCCTCGAGGCCCCGTTCTCG
GTGCTCGTCCCGTCGTTCCTGCTCTCGGAGATCCAGCGCGCCTTCGAGATCGGCTTCCTGATCTTTCTGCCGTTCCTGAT
CATCGATCTGGTGGTGGCTGCCGTCCTTATGTCCATGGGGATGATGATGGTACCTCCGGCCGTCGTCTCCATGCCCTTCA
AACTGGCCTTCTTCGTGGTGGGCGACGGCTGGAGCCTGATCTCGGGCGCTCTCGTGCGAAGTTACTTCTGA

Protein sequence :
MFMPLLVLAATAAPAAGQSLSVDFGDGSSLTTRSVQLIVLITLLSLVPALGMMITCFPFIVTVLSILRQAIGLQQAPPNM
LIVSLALFLTWYIMDPVFTEAWTRGIEPLTRNEIDIQQALVLASAPFRGFMAARLDLETFSTLQALRPGEISPPLEAPFS
VLVPSFLLSEIQRAFEIGFLIFLPFLIIDLVVAAVLMSMGMMMVPPAVVSMPFKLAFFVVGDGWSLISGALVRSYF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-10 42
lscR AAO18040.1 LscR Virulence TTSS locus Protein 3e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001168934.1 flagellar biosynthesis protein FliP VFG2494 Protein 7e-22 47
fliP YP_001168934.1 flagellar biosynthesis protein FliP VFG1259 Protein 7e-23 47
fliP YP_001168934.1 flagellar biosynthesis protein FliP VFG2338 Protein 8e-19 46
fliP YP_001168934.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-20 45
fliP YP_001168934.1 flagellar biosynthesis protein FliP VFG0394 Protein 4e-10 41
fliP YP_001168934.1 flagellar biosynthesis protein FliP VFG0188 Protein 3e-10 41