Gene Information

Name : rph (Rsph17025_2658)
Accession : YP_001168850.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2701355 - 2702068 bp
Length : 714 bp
Strand : +
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCTTCCGGCAGAAAGCTCGACCAGATGCGGTCGGTGTCCATCGAGCCCAACGTGATGAAACATGCCGAGGGCTC
GTGCCTCATCCGCATGGGCGAGACGCATGTGCTCTGCTCGGCCTCGATCGAGGACAAGCCGCCGCCGTTCCTGAAGAACA
CGGGCCTCGGCTGGGTGACGGCCGAATACGGGATGCTGCCGCGCGCCACCACCTCGCGCAACCGGCGCGAAGCCACCGCC
GGCAAACAGAGCGGCCGCACGCAGGAGATCCAGCGCCTGATCGGCCGCGCGCTGCGCGCCGGCATCGACCGCTCGGCGCT
GGGTGAGCGGCAGATCGTGATCGACTGCGACGTGCTGCAGGCCGACGGCGGCACCCGCTGCGCCTCGATCACAGGCGGGT
GGGTCGCGCTGCGGCTGGCCGTCAACAAGCTGCTCAAGGCCGGGATCGTGGTCTCGGACCCGATCGTGGATCACGTCGCG
GCCGTCTCTTGCGGGATCTACGCCGGCCAGCCGGTCCTTGACCTCGACTATGCCGAGGATTCCACCGCCGGCACCGATGG
CAACTTTGTCCTGACCGGCCGGCAGCGGCTGATCGAGGTGCAGATGTCGGCCGAGGGCGCCAGCTTCTCGCGCGACGAGA
TGGGCCAGCTGCTCGACCTCGCCGAGGCGGGCATCGCCGATCTGGTGGCGGCGCAGAAGGCGGCGCTCGGATGA

Protein sequence :
MRPSGRKLDQMRSVSIEPNVMKHAEGSCLIRMGETHVLCSASIEDKPPPFLKNTGLGWVTAEYGMLPRATTSRNRREATA
GKQSGRTQEIQRLIGRALRAGIDRSALGERQIVIDCDVLQADGGTRCASITGGWVALRLAVNKLLKAGIVVSDPIVDHVA
AVSCGIYAGQPVLDLDYAEDSTAGTDGNFVLTGRQRLIEVQMSAEGASFSRDEMGQLLDLAEAGIADLVAAQKAALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-49 50