Gene Information

Name : Rsph17025_2599 (Rsph17025_2599)
Accession : YP_001168792.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : -
Position : 2639101 - 2640411 bp
Length : 1311 bp
Strand : -
Note : TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; SMART: AAA ATPase

DNA sequence : 
ATGTCTGCCGAATTTGAAGGACTCATCTCGGAGATCAGGGCGATTCCCATCAGCCGCCGCTACGGACGCGTGACGGAGAT
CGCGCGCGGGACGATCGCGGCCACCGGTCTGACAAGCGGTGCCGGTCTGGGCGACCGGGTGATCGTCCACGGGACGAACG
GGGAGATCGGAGGGGAGGTGCTGCGCCTGTCACACCAGGAGGTGACAATTCTGCCGGACGCGGCGATCGAGGGTCTGAGC
ATCGGCGATCAGGTCGAACTGGTGGGCTCTGCCGAGATCGCGCCCGACGACAGCTGGATCGGACGGATCGTGGATCCGCT
GGGCCGGCCGCTCGATGGGCGGCCTCTGTTCAGGGGGCCCATCGCGCGGCCCCTGCGCGCGCCGGCGCCTCCGGCGGCCC
GCCGCCGGAGCCTCGGGCCGCGCCTGCCCACCGGAGTTGCCGTTTTTGATACGATGCTGCCGCTCGTGCAGGGTCAGAGG
ACTGGCCTCTTTGCCGGTTCGGGCGTCGGAAAATCCTCGCTCCTGGCAAAGTTTGCGCGTGGCGTCGGCGCGGATGTGGT
GGTCATTGGCCTCATCGGCGAGCGTGGCCGCGAGTTGCGCGACTTCACGGAGCGCGTGCTGGGAGCGAGGGGGATGGCGC
GCTCGGTGGTCGTCACGGCCACCTCGGACCAGTCGCCGCTCATGCGCCGACGGTGCGGCTGGGCCGCGATGGCCGTGGCC
GAGCATTTCCGCGATCAGGGGCTGCATGTCCTTTTGCTGGCCGATTCGATCACCCGTTTCGCCGAAGCGCATCGTGAGGT
TGCCCTCGCGGGCGGGGAAGAGGCGAGCATGCGGGGCTTTCCGCCCTCGACGGCCCACACCATCATGTCCCTCGCCGAGC
GGGCGGGGCCGGGGGCCGAGGGAACGGGCGATATCACCGCTGTCTTCTCGGTGCTGGTGGCGGGCTCGGACATGGAAGAG
CCGGTGGCCGACATTCTCCGCGGCGTGCTCGATGGCCATGTGGTGATGGATCGCCGGATTGCCGAGCGGGGCCGGTTCCC
GGCGATTGACCTGCTCCGCTCCGTGTCGCGCAGCCTGCCCGATGCCGCGTCCGACCCTGAAAACGACCTCATCGTCGAGG
CGAGGCGCCTGCTCGGCGCCTGGGATCGGGCGGAGATGATGATTCAGGCCGGTCTTTACGCGAAGGGCTCGGATCCTCAG
GTGGATGCGGCGATCCGGGTCTGGCCCGCGCTGGATGGCTTTCTGGCCGAGGATGCGCCGGACGGCATCGAGGCGAGCTT
CCGGCGCCTCGCGGCCTGTCTGGGACGGTAG

Protein sequence : 
MSAEFEGLISEIRAIPISRRYGRVTEIARGTIAATGLTSGAGLGDRVIVHGTNGEIGGEVLRLSHQEVTILPDAAIEGLS
IGDQVELVGSAEIAPDDSWIGRIVDPLGRPLDGRPLFRGPIARPLRAPAPPAARRRSLGPRLPTGVAVFDTMLPLVQGQR
TGLFAGSGVGKSSLLAKFARGVGADVVVIGLIGERGRELRDFTERVLGARGMARSVVVTATSDQSPLMRRRCGWAAMAVA
EHFRDQGLHVLLLADSITRFAEAHREVALAGGEEASMRGFPPSTAHTIMSLAERAGPGAEGTGDITAVFSVLVAGSDMEE
PVADILRGVLDGHVVMDRRIAERGRFPAIDLLRSVSRSLPDAASDPENDLIVEARRLLGAWDRAEMMIQAGLYAKGSDPQ
VDAAIRVWPALDGFLAEDAPDGIEASFRRLAACLGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 8e-51 43
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 1e-50 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 1e-50 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 9e-51 43
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-52 43
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-52 43
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 2e-53 43
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-53 43
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-47 42
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-53 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 4e-50 41
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 4e-50 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_2599 YP_001168792.1 FliI/YscN family ATPase VFG0515 Protein 1e-53 43
Rsph17025_2599 YP_001168792.1 FliI/YscN family ATPase VFG0192 Protein 2e-54 42
Rsph17025_2599 YP_001168792.1 FliI/YscN family ATPase VFG0390 Protein 7e-58 42
Rsph17025_2599 YP_001168792.1 FliI/YscN family ATPase VFG2144 Protein 1e-56 41
Rsph17025_2599 YP_001168792.1 FliI/YscN family ATPase VFG0048 Protein 2e-57 41
Rsph17025_2599 YP_001168792.1 FliI/YscN family ATPase VFG1254 Protein 1e-58 41