Gene Information

Name : Rsph17025_2478 (Rsph17025_2478)
Accession : YP_001168671.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Resistance
Product : small multidrug resistance protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 2527355 - 2527669 bp
Length : 315 bp
Strand : -
Note : PFAM: small multidrug resistance protein

DNA sequence :
GTGAGTGCCTGGCTTCTGGTGCTGGTCGCGGGCCTGCTCGAGACCGGCTGGGCGCTGGGTCTGAAATATTCGGATGGCTT
CACCCGCCCGGTGCCGAGCGTGCTGACGGTCGTCGGGGCGCTGGCGAGCTTCTGGCTCCTGAGCCTGGCCATGAAGAGCC
TGCCGGTCGGCACGGCCTACGCGGTCTGGGTGGGCATCGGCGTCGTGGGAACGGCGCTTCTCGCCATGGCGCTGTTCGGT
GAGCCCGCCTCTCCGCTCCGGCTCGGAGGGATCGCGCTCATCGTGGCCGGGGTCGTGGCGCTCAAGTTCGCCTGA

Protein sequence :
MSAWLLVLVAGLLETGWALGLKYSDGFTRPVPSVLTVVGALASFWLLSLAMKSLPVGTAYAVWVGIGVVGTALLAMALFG
EPASPLRLGGIALIVAGVVALKFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-08 41
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 1e-07 41
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 7e-08 41
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-08 41
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 1e-07 41
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 7e-08 41
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 7e-08 41
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 7e-08 41
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 7e-08 41
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 7e-08 41
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 7e-08 41
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 7e-08 41
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 7e-08 41
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 1e-07 41
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 7e-08 41
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-08 41
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-07 41
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 7e-08 41
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 7e-08 41
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 1e-07 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0378 Protein 1e-22 56
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0192 Protein 3e-14 46
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0449 Protein 3e-09 45
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0324 Protein 5e-09 45
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0448 Protein 6e-07 44
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0322 Protein 5e-10 43
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein NC_002695.1.913273.p Protein 2e-09 43
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0150 Protein 2e-09 43
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein CP004022.1.gene1549. Protein 1e-08 42
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0323 Protein 3e-08 41
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0139 Protein 1e-07 41
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0377 Protein 1e-07 41
Rsph17025_2478 YP_001168671.1 small multidrug resistance protein BAC0140 Protein 9e-08 41