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Name : Rsph17025_2247 (Rsph17025_2247) Accession : YP_001168442.1 Strain : Rhodobacter sphaeroides ATCC 17025 Genome accession: NC_009428 Putative virulence/resistance : Resistance Product : major facilitator transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 2282393 - 2283592 bp Length : 1200 bp Strand : + Note : PFAM: major facilitator superfamily MFS_1 DNA sequence : ATGCAAAAGCCCCGGCTTGCCCTTGCCTTCATCCTGATCACCGTCACGCTCGATGCGATCGGGATCGGGCTGATCTTTCC GGTCATGCCGGACCTGATCCTCGAGATCACCGGCCAGCCCCTGTCGGACGCGGCGGTCTGGGGAGGCCTCTTGTCGGCCT CCTTCGCGGTCATGCAGTTCCTGTTCGGCCCGACCATCGGAAGCCTGTCGGACCGGTTCGGGCGCCGGCCGATCCTGCTC GGCTCGCTCGTCATCATGGCGGCCACCTATCTCGCCATGGCGCTGGCCCCCACCATGGCGATCCTGCTCGCCGCGCGGAT CGTGGCGGGGATCGTCTCGGCCACCTACGCCACGGCCTCGGCCTTCATCGCCGACGTGACCCCGCCCGAGGACCGCGCCA AGCGATTCGCCCTGATCGGCGCGGGCTTCGGGATCGGCTTCGTGCTGGGCCCCGCCATGGGCGGCCTGCTGGCGGGGATC GACCTGCGCGCGCCCTTCCATGCGGCGGCGCTGATGGCGGTGCTGAACCTCATCCTCGGCAGCCTCATCCTGCCCGAAAC GGTGACCGACGCCACCCGCCGCCCCTTCTCTCTCGCCCGCGCCAACCCGCTCGGCGCGCTGCGGGCCGTGGCGCGCCTGC CCGAGCTGCGCCGCCCGCTCGCGGTCTTCCTGATCCTGGGGATCGCGATGAACGTCTACCCGGCCGTCTGGGCCTTCTAC GGCCAGGCCGCCTTCGGCTGGGGCGCGGCCATGGTCGGCGCCTCGCTCGCGCTTTACGGCATCAGCTTCGCCGTGGGACA GGTGGCGCTGGTCGGGCCCGCGATCCGCCGCCTCGGCGAGCATCGCACGGCGCTCTTCGGCATCTGGGTCGATATCCTCA CGCTGACCGCCTTCGGCTTCCTGGCCTCGGGAACCGGCGCGCTTCTCGTCATCCCCCTGACCGCATTGGGCGGCGTCGTG GTGCCTGCGCTGCAATCCATCCTGTCGCGCGGCACGCCCGCCGATGCGCAGGGCGAGCTGCAGGGCCTGCTCGCCTCTCT CAATGCCGTCGCGATGATCACCTCACCGCTCGTGATGACGGCCACGTTCCGCGCCTTCACGCAGGACGGCGCGCCGCTGC ATCTGCCCGGCGCGCCGTTCCTTCTGGCCGCGCTCCTGATGGTCGGGGCGCTCGTCCTTCATCTCGCCCGCCGCGCCTGA Protein sequence : MQKPRLALAFILITVTLDAIGIGLIFPVMPDLILEITGQPLSDAAVWGGLLSASFAVMQFLFGPTIGSLSDRFGRRPILL GSLVIMAATYLAMALAPTMAILLAARIVAGIVSATYATASAFIADVTPPEDRAKRFALIGAGFGIGFVLGPAMGGLLAGI DLRAPFHAAALMAVLNLILGSLILPETVTDATRRPFSLARANPLGALRAVARLPELRRPLAVFLILGIAMNVYPAVWAFY GQAAFGWGAAMVGASLALYGISFAVGQVALVGPAIRRLGEHRTALFGIWVDILTLTAFGFLASGTGALLVIPLTALGGVV VPALQSILSRGTPADAQGELQGLLASLNAVAMITSPLVMTATFRAFTQDGAPLHLPGAPFLLAALLMVGALVLHLARRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 4e-42 | 42 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 4e-42 | 42 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 4e-42 | 42 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 4e-42 | 42 |
| tetA | CAJ77034.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 4e-44 | 42 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-46 | 42 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-46 | 42 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 1e-46 | 42 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 1e-46 | 42 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 1e-46 | 42 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 1e-46 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | Y19114.gene.p01 | Protein | 7e-51 | 45 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | AF090987.gene.p01 | Protein | 9e-49 | 44 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | AY264780.2.gene3.p01 | Protein | 1e-52 | 43 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | NC_010410.6002612.p0 | Protein | 3e-44 | 42 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | AF133140.gene.p01 | Protein | 3e-44 | 42 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | X75761.gene.p01 | Protein | 5e-47 | 42 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | AY743590.gene.p01 | Protein | 7e-55 | 42 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | NC_010410.6002597.p0 | Protein | 6e-47 | 42 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | CP001485.1.gene2821. | Protein | 6e-47 | 42 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | AF534183.gene.p01 | Protein | 5e-47 | 42 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | AF133139.gene.p01 | Protein | 3e-42 | 41 |
| Rsph17025_2247 | YP_001168442.1 | major facilitator transporter | NC_011586.7045189.p0 | Protein | 6e-41 | 41 |
