Gene Information

Name : Rsph17025_0213 (Rsph17025_0213)
Accession : YP_001166428.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Unknown
Product : succinic semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 206007 - 207485 bp
Length : 1479 bp
Strand : -
Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
ATGCTCGACTCCGTCACCGACCTGCGTTCGATACTCAAGGATCCGTCGCTGCTCGAAACCCGCGCCTTCGTGGCGGGCGA
GTGGGTGGCGGCCGATGACGGTGCCAGCTTCGAGGTAACGAACCCCGCCCGCGGCGACGTGATCTGCACCATCCCGGACC
TCGGCCGGGCCGAGACCGCGCGTGCCATCGCCGCCGCGGCCGAGGCGATGAAGGACTGGGCCGCCCGCACCGGCAAGGAA
CGCGCGCAGGTGATGCGCAAGTGGTTCGACCTGATGATGGCCAACCAGGACGACCTCGGCGCGATCCTGACGGCCGAGAT
GGGCAAGCCCCTCGCCGAGGCCAAGGGCGAGATCGCCTATGGCGCCTCCTTCATCGAATGGTTCGGCGAAGAGGCCAAGC
GCGTCTATGGCGAGACCATCCCCGGCCACATGCGCGACAAGCGCATCACCGTGCTCAAGCAGCCGATCGGCGTCGTGGGC
TCGATCACGCCCTGGAACTTCCCGAACGCGATGATCACCCGCAAATGCGGCCCGGCGCTGGCCGCGGGCTGCGGCTTCGT
CGCCCGCCCCGCCGCCGAAACCCCGCTGTCGGCGCTGGCGCTGGCGGTGCTGGGCGAGCGCGCGGGGCTGCCGAAGGGCA
TCCTGTCGGTCATCACCTCGAGGAAATCCTCGGACATCGGCAAGGAGTTCTGCGAGAATCCGGCCGTCCGCAAGCTGACC
TTCACGGGCTCGACCGAGGTGGGGCGCATCCTGCTCAGGCAGGCGGCGGATCAGGTGATGAAATGCTCGATGGAGCTGGG
CGGCAACGCGCCCTTCATCGTTTTCGACGACGCCGACCTCGACGCGGCGGTGCAGGGCGCCATGGCGTCGAAGTTCCGCA
ACAACGGCCAGACCTGCGTCTGCGCGAACCGCATCTATGTGCAGGCCGGCGTCCATGACGCCTTCGCCGAGAAGCTGGCG
GCGGCGGTGAAGAAGCTGCGCGTCGGCGACGGGCTGGTGGAGGGGACCGAGGCCGGCCCGCTCATCAACGAGAAGGCGGT
CGAGAAGGTCGAGGAACATATCCGCGACGTGCTCGACGGCGGCGGCGAGGTGTTGACCGGCGGCAAGCGGCACGAGCTGG
GCGGCACCTTCTTCGAGCCGACCGTCGTGACCGGCGTCACGCAGGAGATGAAGGTCTCAAACGAAGAGACCTTCGGGCCG
CTCGCGCCGCTCTTCCGGTTCGACACCGAAGAGGAGGTGATCGGCTATGCGAACGACACGATCTTCGGCCTTGCCTCCTA
CTTCTACGCTCGCGACGTGGGCCGCATCACCCGCGTCCAGGAGGCGCTGGAATATGGCATCGTCGGCGTCAACACCGGCA
TCATCTCGACCGAGGTCGCACCCTTCGGCGGGGTGAAGCAGTCCGGCCTCGGCCGCGAGGGCTCGCGGCACGGCATCGAG
GATTATCTCGAGATGAAATACATCTGCCTCTCGATCTGA

Protein sequence :
MLDSVTDLRSILKDPSLLETRAFVAGEWVAADDGASFEVTNPARGDVICTIPDLGRAETARAIAAAAEAMKDWAARTGKE
RAQVMRKWFDLMMANQDDLGAILTAEMGKPLAEAKGEIAYGASFIEWFGEEAKRVYGETIPGHMRDKRITVLKQPIGVVG
SITPWNFPNAMITRKCGPALAAGCGFVARPAAETPLSALALAVLGERAGLPKGILSVITSRKSSDIGKEFCENPAVRKLT
FTGSTEVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVQGAMASKFRNNGQTCVCANRIYVQAGVHDAFAEKLA
AAVKKLRVGDGLVEGTEAGPLINEKAVEKVEEHIRDVLDGGGEVLTGGKRHELGGTFFEPTVVTGVTQEMKVSNEETFGP
LAPLFRFDTEEEVIGYANDTIFGLASYFYARDVGRITRVQEALEYGIVGVNTGIISTEVAPFGGVKQSGLGREGSRHGIE
DYLEMKYICLSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 7e-143 63