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Name : Rsph17025_1832 (Rsph17025_1832) Accession : YP_001168028.1 Strain : Rhodobacter sphaeroides ATCC 17025 Genome accession: NC_009428 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 1874255 - 1875073 bp Length : 819 bp Strand : + Note : PFAM: Integrase, catalytic region DNA sequence : ATGCGGATTGCGGAGGCGGCCCCGCGGCGGCTGCCGGCGACGGTGTATCTGCGCGAGCTTCGCGAACGCGGCTACGAGGG CGGCATCTCGATCCTGAAGGACTGGCTGGCGGAGCAGCATCCGGCCGTTCCCGCGCCGCCGATCGTGCGGTTCGAGACCC CGCCCGGGCGGCAGGCGCAGGCGGACTGGACGGCGATCCGGCGCGGCCGGAACAAGTTGTCGGCCTTTGTCGGCACGCTG GGCTTCAGCCGGCTGTCGTTCGTCTGGTTCGCCGACAACGAAAGGTTCGACACGCTGATCGAGGCGCACGAGCGGTTCTT CGACGCGCTCGGCGGGGTGCCGCACACGATCCTCTACGACAACATGAAGACGGTGCTGATCGACCGCGACGCCTATGGCC CCGGCCAGCACCGGTTCAACGAAGGGTTCCGGGACTTCGCCAGGCACCACGGCTTCGGCCCGCGGATGTGCGCCCCGTAT CGGGCGCAGACGAAAGGCAAGGTCGAGCGGTTCAACCGCTATCTCAAGGAGAGCTTTGTCTGGCCGCTGGAGAGCAGGCT GACGGGCCAGGGGCTGATCCTTGACGCCGCGACGGCCAACGCGCGTGTCGGCGCGTGGCTGCGCGACGTGGCCAACCTGC GCATCCATGCCGAGACGAAGGAACGCCCGGTCGACCGCTTCGACATGGAGAAGGCGCAGCTCCTGCCCCGCGGTCCGGCC TGGACCGGCATCGTGCCCACGGTGCCCGCGATCCTGCACGACATTCACGTCCCCCAGCATGACCTGTCGGTCTACGACGC GATCGGGAGGCTGGCATGA Protein sequence : MRIAEAAPRRLPATVYLRELRERGYEGGISILKDWLAEQHPAVPAPPIVRFETPPGRQAQADWTAIRRGRNKLSAFVGTL GFSRLSFVWFADNERFDTLIEAHERFFDALGGVPHTILYDNMKTVLIDRDAYGPGQHRFNEGFRDFARHHGFGPRMCAPY RAQTKGKVERFNRYLKESFVWPLESRLTGQGLILDAATANARVGAWLRDVANLRIHAETKERPVDRFDMEKAQLLPRGPA WTGIVPTVPAILHDIHVPQHDLSVYDAIGRLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 1e-54 | 46 |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 8e-54 | 46 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 1e-54 | 46 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 8e-54 | 46 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 1e-54 | 46 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 8e-54 | 46 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 1e-54 | 46 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 8e-54 | 46 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 6e-54 | 46 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 6e-54 | 46 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 1e-54 | 46 |
| unnamed | CAD33718.1 | hypothetical protein | Not tested | PAI I 536 | Protein | 5e-40 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17025_1832 | YP_001168028.1 | integrase catalytic subunit | VFG1626 | Protein | 8e-55 | 46 |
| Rsph17025_1832 | YP_001168028.1 | integrase catalytic subunit | VFG1607 | Protein | 8e-55 | 46 |
| Rsph17025_1832 | YP_001168028.1 | integrase catalytic subunit | VFG1461 | Protein | 8e-55 | 46 |
| Rsph17025_1832 | YP_001168028.1 | integrase catalytic subunit | VFG1514 | Protein | 8e-55 | 46 |
| Rsph17025_1832 | YP_001168028.1 | integrase catalytic subunit | VFG1459 | Protein | 3e-40 | 45 |
