Gene Information

Name : Rsph17025_1531 (Rsph17025_1531)
Accession : YP_001167730.1
Strain : Rhodobacter sphaeroides ATCC 17025
Genome accession: NC_009428
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1570355 - 1571290 bp
Length : 936 bp
Strand : +
Note : PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein

DNA sequence :
ATGGCGCCTGCGGGGATGGAGCGGTGGATCTCGGCCTTCCTCGAGGCGCAGGCGGCCGAGCTGGATGCCGCGCGCAACAC
GCGCCTGGCCTACGGGCGCGATCTGAAGGACTTTGCCGGCTGGCTCGCGCGCCGGTCCGAGGAGTTCGCCACGGCCGACC
GCGCGGCGGTCGAGGCCTACCTCGTCTTCTGCGATGCGCAGGGCCTGTCGCCCGCCACGCGTGCGCGGCGGCTCTCGTCG
ATTCGGCAGCTGTACCGCTTTGCCCATGAAGAGGGATGGCGCGCCGACAACCCCGCCATCCGACTCCGCGGGCCGGGGCG
CGCCCGCCGCCTGCCCAAGACGCTCGAGATCGAGGAGGTGGACCGGCTGCTGGACGCCGCCCGGGACAAGGGGCGGCGCG
CGGCCGATCAGGTCCGCAACCGCTGCCTGCTTGAACTGCTCTACGCCACGGGGATGCGGGTGTCGGAGATGGTGGGCCTG
CCGGTCGCGGCGGCGCGGGGCAATCCGCAGATGATCCTCGTGCGCGGCAAGGGCGGCAAGGAGCGTATGGTGCCGCTCTC
TCCGCCCGCGCGCGAGGCGCTGGCGGACTGGCTGCGGGTGCGCGACGAGGCCGAGGCCGCGGGGCAGAAGGCGGGGCGCG
TCCCCTCGCGCTTCCTGTTTCCGGGTTCCGGTGCCGCGGGCCATCTGACGCGCGAATATTTCTACGTCCTGATCAAGCAG
ATCGCGGTGCTGGCAGGAGTCGATCCCTCGAAGGTCACGCCCCACACGCTGCGCCACGCCTTTGCCACGCATCTGCTGGC
GGGAGGGGCCGACCTGCGGGTGATCCAGACCCTGCTCGGTCATGCCGACCTCTCCACCACCGAGATCTACACCCATGTGC
TCGACGAGCATCTGAAGGACCTCGTGCTCAGGCACCATCCGCTTGCACGCGAATGA

Protein sequence :
MAPAGMERWISAFLEAQAAELDAARNTRLAYGRDLKDFAGWLARRSEEFATADRAAVEAYLVFCDAQGLSPATRARRLSS
IRQLYRFAHEEGWRADNPAIRLRGPGRARRLPKTLEIEEVDRLLDAARDKGRRAADQVRNRCLLELLYATGMRVSEMVGL
PVAAARGNPQMILVRGKGGKERMVPLSPPAREALADWLRVRDEAEAAGQKAGRVPSRFLFPGSGAAGHLTREYFYVLIKQ
IAVLAGVDPSKVTPHTLRHAFATHLLAGGADLRVIQTLLGHADLSTTEIYTHVLDEHLKDLVLRHHPLARE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-28 42
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-28 42