|
Name : Rsph17025_1344 (Rsph17025_1344) Accession : YP_001167548.1 Strain : Rhodobacter sphaeroides ATCC 17025 Genome accession: NC_009428 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 1378921 - 1380330 bp Length : 1410 bp Strand : - Note : TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp DNA sequence : ATGAGCAAAGTAGCTGATGCTCTCAAACTGATGAAAGACGAGGAGGTCGAATATGTCGACATCCGCTTCACCGATCCGCG CGGCAAGCTCCAGCATGTGACGCTGGTGGCTGACCTCGTCGATGAGGACTTCTTCGAGGAAGGCTTCATGTTCGACGGCT CGTCCATCGCCGGCTGGAAGTCGATCGACCAGTCGGACATGAAGCTGATCCCGGACGCGGGCTCGGTCTATATCGACCCG TTCTATGCGGAAAAGACGCTCTGCGTGCATTGCAACGTCGTCGAGCCGGACACGGGCGAAGCCTACAGCCGCGACCCGCG CGGCACGGCCGTCAAGGCCGAGGCCTACCTGAAGGCGTCGGGCATCGGTGACGTGGCCTACTTCGGGCCGGAAGCCGAGT TCTTCATCTTCGACGACGTGCGCTATTCGGTGACGCCGGCGAAGGTCGCCTATCAGATCGACGCCGATGCGGCGGCCTGG AACACCGACTCGGAATACGAGATGGGCAACCTCGCCCACCGCGCCGGCCACAAGGGCGGCTACTTCCCGGTGAACCCGAT CGACGAGGCCCAGGACCTGCGCGGCGAGATGCTCTCGACCATGAAGCGCATGGGCATGAAGGTCGACAAGCACCACCATG AAGTGGCGACCTGCCAGCACGAACTCGGGCTGATCTTCGGCGGGCTCACCGAGCAGGCCGACAACATCCTGAAGTACAAG TATGTCATCCAGAACGTCGCGGCCGCCTATGGCAAGACCGTGACCTTCATGCCGAAGCCCATGAAGGGCGACAACGGCTC GGGCATGCACGTCAACATGTCGATCTGGAAGGACGGCAAGCCGCTCTTCGCCGGCGACAAGTACGCCGACCTCTCGCAAG AGGCGCTGTGGTTCATCGGCGGCATCCTGAAGCACGCGAAGGCGCTGAACGCGCTGACGAACCCGGCGACCAACAGCTAT AAGCGCCTGATCCCGGGCTTCGAGGCCCCGGTTCTGCGCGCCTACTCGGCCCGCAACCGCTCGGGCTGCGTCCGTATTCC GTGGACCGAATCGCCGAAGGCCAAGCGCGTCGAAGCCCGCTTCCCCGATCCGTCGGCGAACCCGTATCTCGCCTTCGCGG CGCTGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCGACCCGGGCCCGGCTTCGGACAAGGACCTCTACGACCTG CCGCCGGAAGAACTGGCCGCCATCCCGACCGTCTGCGGCTCGCTCCGCGAGGCGCTCGAGGAGCTGGAGAAGGACCACGA CTTCCTGCTCGCCGGCGACGTCTTCACCAAGGACCAGCTCGAGGGCTACATGGCCCTCAAGTGGGAAGAGGTCTATGCCT ACGAGCACACGCCGCACCCGGTGGAATATCAGATGTACTACAGCTGCTGA Protein sequence : MSKVADALKLMKDEEVEYVDIRFTDPRGKLQHVTLVADLVDEDFFEEGFMFDGSSIAGWKSIDQSDMKLIPDAGSVYIDP FYAEKTLCVHCNVVEPDTGEAYSRDPRGTAVKAEAYLKASGIGDVAYFGPEAEFFIFDDVRYSVTPAKVAYQIDADAAAW NTDSEYEMGNLAHRAGHKGGYFPVNPIDEAQDLRGEMLSTMKRMGMKVDKHHHEVATCQHELGLIFGGLTEQADNILKYK YVIQNVAAAYGKTVTFMPKPMKGDNGSGMHVNMSIWKDGKPLFAGDKYADLSQEALWFIGGILKHAKALNALTNPATNSY KRLIPGFEAPVLRAYSARNRSGCVRIPWTESPKAKRVEARFPDPSANPYLAFAALLMAGLDGIKNKIDPGPASDKDLYDL PPEELAAIPTVCGSLREALEELEKDHDFLLAGDVFTKDQLEGYMALKWEEVYAYEHTPHPVEYQMYYSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 3e-100 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Rsph17025_1344 | YP_001167548.1 | glutamine synthetase, type I | VFG1399 | Protein | 1e-99 | 53 |
