Gene Information

Name : Saro_3667 (Saro_3667)
Accession : YP_001166052.1
Strain :
Genome accession: NC_009427
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 297019 - 297798 bp
Length : 780 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR

DNA sequence : 
ATGGGCAGGCTATCGGGCAAGGTGGCGATCGTCACCGGTGGCGCGCGCGGCATGGGTGCGGCGACAAGCCGGCTTTTCGT
GGCCGAGGGCGCGAAAGTGGCGATTGCCGACGTTCTGGACGAGGCCGGGGAGGCGCTGGCGGCAGAGCTTGGCGATGCGG
CGCGCTTCTTCAAGCTTGACGTGACCAGCGAGGACAACTGGGCTTCGGTCGTCAGCGAAGTCGAGGCGGCGCTGGGGCCG
GTCGACGTGCTGGTGAACAACGCCGGCATCCTCATGTTCAAGAGCCTGCTCGAGACGACCAAGGCGGACTACGAGAAGGT
GCTGGGCGTCAACCTGGTTGGCGAGTTCCTGGGCATCAAGGCAGTGGCGCCGGGAATGATCGCGCGCGGCAAGGGTTCGA
TCGTCAACATCTCTTCGGTAGACGGAATGAAGGGCGCGAACAGCCTTGTCGCCTACGCCTCGTCCAAGTGGGGCGTGCGC
GGGCTGACCAAGGTCGCTGCAATGGAGCTTGGTCACAAGGGCATCCGCGTCAACTCAGTCCATCCCGGCGGGGTCGACAC
GGTCATGTCCAACCATTCCGGCGCAGCGCGCGAGGACGTGGACAAGGGCTATGCCAACGTGCCGCTGCAGCGCATCGGCG
GGCCCGAGGAAGTGGCGGCGGCGAGCCTGTTCCTGGCGAGCGACGACGCATCCTACCTCCACGGCGCGGAGATCGTGGTG
GATGGCGGGATGACCGTCGGCACCTACTACATGGGCTTTCCGGGTTCGCCGGGCATGTGA

Protein sequence : 
MGRLSGKVAIVTGGARGMGAATSRLFVAEGAKVAIADVLDEAGEALAAELGDAARFFKLDVTSEDNWASVVSEVEAALGP
VDVLVNNAGILMFKSLLETTKADYEKVLGVNLVGEFLGIKAVAPGMIARGKGSIVNISSVDGMKGANSLVAYASSKWGVR
GLTKVAAMELGHKGIRVNSVHPGGVDTVMSNHSGAAREDVDKGYANVPLQRIGGPEEVAAASLFLASDDASYLHGAEIVV
DGGMTVGTYYMGFPGSPGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 1e-20 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 5e-21 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 2e-20 41
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-20 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-20 41