Gene Information

Name : Saro_3420 (Saro_3420)
Accession : YP_001165806.1
Strain :
Genome accession: NC_009427
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 21234 - 21992 bp
Length : 759 bp
Strand : -
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR

DNA sequence :
ATGAACGCGCTGTTCGACCTTTCCGGCAAGGCCGCGATCGTCACCGGCTCCACGCGCGGGATCGGCCGCGCGATTGCCGA
GGCGCTTGTCGCGGCCGGCGCGCGGGTCGTGATTTCCAGCGAGGATGCGGCCGATACCGCGCGCGTGGCGGCGGAGCTTG
GCATGCCCGGCTGCGCCTGCGACGTTGCCGATGACCTTCAGCTTGCCGCCCTTGTCGAGTTTTCGCTTGCTTCGCTGGGG
CGGCTCGACGTGCTGGTTTGCAACGCGGGGATCACCGGCAAGGCGGGCCCCTTCGCCGAGATCGACATGGACGATTACGC
ACGCGTCATGGCGATCAACCTGCGCAGCCAGGTCGTGATGTGCAACCTTGCCCTGCCGCACATCGCGGCGGGCGGGGGCG
GCGCAGCCATTCTGGTGGCGAGCCTGTCAGCCCTGCGCGGCAATGGCCGGATCAATGCCTATGCCCTCGCCAAGGCAGGC
GTCGCCCAGCTTGCGCGCAACCTTGCGGTGGAGTGGGGACCACGGGCCGTCCGGGTCAATGCGGTTTCGCCGGGGTTCAT
CGCGACCGAATTGTCCGGCCCTCTGCTGGCTGACGAGGGCTTCATGGCGCGCCGCATGTCGATGACCCCGCTGCGCCGCC
CCGGAACGCCCGCGGAGGTCGCGGGTGCGGCGGTGTTCCTTGCCTCGCCGGCCGGCGGCTTCGTTACCGGGCACAACCTG
GTGGTGGACGGAGGAACGCTCGTTACCGATGGATCGTAG

Protein sequence :
MNALFDLSGKAAIVTGSTRGIGRAIAEALVAAGARVVISSEDAADTARVAAELGMPGCACDVADDLQLAALVEFSLASLG
RLDVLVCNAGITGKAGPFAEIDMDDYARVMAINLRSQVVMCNLALPHIAAGGGGAAILVASLSALRGNGRINAYALAKAG
VAQLARNLAVEWGPRAVRVNAVSPGFIATELSGPLLADEGFMARRMSMTPLRRPGTPAEVAGAAVFLASPAGGFVTGHNL
VVDGGTLVTDGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-25 42
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-25 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-25 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 5e-26 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-26 41