Gene Information

Name : Saro_3872 (Saro_3872)
Accession : YP_001165643.1
Strain :
Genome accession: NC_009426
Putative virulence/resistance : Unknown
Product : succinic semialdehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 41255 - 42727 bp
Length : 1473 bp
Strand : +
Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase

DNA sequence :
TTGGGCGTTACGATCCCCCCGCTCGAGCGCAGCGATTTCCTGACCGGCCAACCACTTGTCGACGGCACCGAGATCTGTGC
CGGCTCTACCTACGCGGTCACTAACCCGGCAACCGGCAAAACGCTGGCGAATGTCGTCAAGCTGGGCGCTGCCCAGACGC
GTCGGGCAATTGAAAGCAATTCCCGCGCCTTGATCGATTGGCGCAAGCGGCCCGCTCAGGAACGCGCGCGCCTGCTGCAT
GACTGGCTGGCGCTGGTCCGGCTCCATCGCCACGATCTTGGTTTGCTGATGACCGCCGAACAGGGCAAACCGCTGGCCGA
AGCGCTGGGCGAGGTCGATTACGCCGCAAGTTTCATCCAGTGGTTCGCTGAAGAGGCGCGCCGTGTCTATGGCGAGGTCA
TTCCGGCCAGCGCTGACCGGCGGATCGTCGTGATCCGTCAGCCGGTCGGCGTGGCGGGCGCCATTACGCCGTGGAACTTT
CCCGCCGCGATGATCACCCGCAAGGTCGCGCCTGCACTGGCGGCGGGCTGCACCGTGACCCTCAAACCGTCCGAACTCAC
CCCCATGACCGCTTTCGCTCTGGCGAAGCTCGCTCGCGAAGCGGGCGTTCCGCCCGGCGTGTTCAACGTGGTCTGCGGGG
ATGCGCCCGAAATCGGATCGGTCCTGACCAGCCATCCCGATGTTACGAAGTTCACCTTCACCGGTTCGACCGCGATTGGC
AAGCTGTTGACCGCTCAATGCGCTGCCACGCTCAAGCGGGTTTCGATGGAACTGGGCGGCAATGCCCCGCTGCTGGTGTT
CGACGATGCCGATCTCGATCAGGCTGTCGAGGGGGCGATCGCCTCGAAATTCCGTAACACCGGACAGACCTGCGTTTGCG
CCAACCGGATCCTCGTGCAAAGCGGCATTCATGACCGCTTCGTCGAGGCGCTGGCCGCCAGGGTCTCCGCGTTCCGGGTC
GGAAACGGCCTTGAAGGTGCAACCGACCAGGGACCGTTAATCACCGCATCAGCCTTGGCCAAGGTTCAGGGACATGTCGC
CGATGCCGTGGCGCAAGGTGCCCAGCTGGTCACCGGCGGCAAGAGACACGAGGCCGGAGAACTGTTCTTCCAACCAACTG
TGCTGACTGGAGCGAGACCGGCGATGCGGCTGGCGGACGAGGAGACCTTCGGGCCGGTGGCCCCGGTGTTCCGTTTCGAA
ACCGAGGCCGAAGCGCTGGCGCTTGCCAACGCCACGCACTCGGGGCTGGCGGCCTATGCCTTCACCCGCGACATTGACCG
CGCCTGGCGGGTTTCCGAAGGCCTTGAGACCGGGATGGTCGGCTTGAACAGCGGCATCGTCTCGACCGAGACCGCCCCGT
TTGGCGGCATCAAGGAATCGGGACTGGGCCGAGAAGGTTCGCGACACGGTATTGAAGAATTCCTGGAGATGAAGACCATC
AGTGTTGGGGTCCGGCCCGAGAGTCCGGTGTAA

Protein sequence :
MGVTIPPLERSDFLTGQPLVDGTEICAGSTYAVTNPATGKTLANVVKLGAAQTRRAIESNSRALIDWRKRPAQERARLLH
DWLALVRLHRHDLGLLMTAEQGKPLAEALGEVDYAASFIQWFAEEARRVYGEVIPASADRRIVVIRQPVGVAGAITPWNF
PAAMITRKVAPALAAGCTVTLKPSELTPMTAFALAKLAREAGVPPGVFNVVCGDAPEIGSVLTSHPDVTKFTFTGSTAIG
KLLTAQCAATLKRVSMELGGNAPLLVFDDADLDQAVEGAIASKFRNTGQTCVCANRILVQSGIHDRFVEALAARVSAFRV
GNGLEGATDQGPLITASALAKVQGHVADAVAQGAQLVTGGKRHEAGELFFQPTVLTGARPAMRLADEETFGPVAPVFRFE
TEAEALALANATHSGLAAYAFTRDIDRAWRVSEGLETGMVGLNSGIVSTETAPFGGIKESGLGREGSRHGIEEFLEMKTI
SVGVRPESPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 7e-128 56
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 2e-83 43