Gene Information

Name : Saro_3848 (Saro_3848)
Accession : YP_001165619.1
Strain :
Genome accession: NC_009426
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (acceptor)
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.99.3
Position : 17608 - 19113 bp
Length : 1506 bp
Strand : -
Note : PFAM: aldehyde dehydrogenase

DNA sequence :
ATGGCTACGCAGTTGAGAAGTGCAGAAAACGAATACGGGATCAAGTCCGAGTACGGCCACTATATCGGCGGCGAGTGGAT
CGCCGGGGACAGCGGCAAGACCATCGATCTGCTCAATCCCTCGACCGGCAAGGTGCTGACCAAGATTCAGGCCGGCAACG
CCAAGGATATCGAACGCGCGATTGCCGCCGCCAAGGCGGCGTTTCCCAAGTGGTCGCAGAGCCTGCCCGGCGAGCGCCAA
GAAATCCTGATCGAGGTTGCGCGTCGTCTGAAGGCACGCCATTCGCACTATGCCACCCTCGAAACGCTCAACAACGGCAA
GCCGATGCGCGAATCGATGTATTTCGATATGCCGCAGACGATCGGGCAGTTTGAGCTGTTCGCCGGTGCCGCCTATGGCC
TGCACGGCCAGACGCTCGATTATCCCGACGCGATCGGCATCGTCCACCGCGAACCGCTCGGCGTCTGCGCGCAGATTATC
CCATGGAACGTGCCGATGTTGATGATGGCGTGCAAGATCGCGCCCGCGCTGGCCTCGGGCAACACTGTCGTTCTGAAGCC
GGCCGAAACGGTCTGCCTTTCGGTGATTGAATTCTTCGTGGAAATGGCTGATCTGTTGCCGCCGGGTGTGATCAACGTCG
TCACCGGCTATGGCGCGGACGTGGGCGAGGCGCTGGTCACCAGCCCCGATGTCGCCAAGGTGGCCTTCACCGGTTCGATC
GCCACCGCGCGCCGGATCATCCAGTATGCCTCGGCCAACATCATCCCCCAGACGCTCGAGTTGGGCGGCAAGTCGGCGCA
CATCGTGTGTGGCGATGCCGACATCGACGCGGCGGTGGAAAGCGCGACTATGTCGACCGTGCTCAACAAGGGCGAAGTCT
GTCTGGCCGGTTCGCGCCTGTTCCTGCACCAGTCGATCCAGGACGAGTTCCTGGCCAAGTTCAAGACCGCGCTTGAAGGC
ATCCGCCAGGGCGACCCGCTCGACATGGCGACCCAGCTTGGCGCCCAGGCATCGAAGATGCAGTTTGACAAGGTGCAAAG
CTACCTGCGCCTGGCCACCGAGGAAGGGGCCGAGGTCCTGACCGGCGGCAGCCGCTCGGATGCCGCAGATCTGGCCGATG
GCAATTTTATCAAGCCGACCGTGTTCACCAACGTCAACAACTCCATGCGGATCGCGCAGGAAGAGATCTTCGGACCGGTT
ACCAGCGTCATCACCTGGAGCGACGAAGACGACATGATGAAGCAGGCCAACAATACAACTTACGGCCTCGCTGGCGGCGT
CTGGACCAAGGACATCGCCCGAGCCCACCGGATTGCGCGCAAGCTCGAAACTGGCACGGTCTGGATCAATCGCTACTACA
ACCTGAAGGCCAACATGCCGCTGGGCGGTTACAAGCAAAGCGGCTTCGGGCGTGAATTCAGCCATGAAGTGCTGAATCAC
TACACCCAGACCAAGTCGGTGGTGGTCAACCTCCAGGAAGGTCGCACCGGAATGTTCGATCAGTGA

Protein sequence :
MATQLRSAENEYGIKSEYGHYIGGEWIAGDSGKTIDLLNPSTGKVLTKIQAGNAKDIERAIAAAKAAFPKWSQSLPGERQ
EILIEVARRLKARHSHYATLETLNNGKPMRESMYFDMPQTIGQFELFAGAAYGLHGQTLDYPDAIGIVHREPLGVCAQII
PWNVPMLMMACKIAPALASGNTVVLKPAETVCLSVIEFFVEMADLLPPGVINVVTGYGADVGEALVTSPDVAKVAFTGSI
ATARRIIQYASANIIPQTLELGGKSAHIVCGDADIDAAVESATMSTVLNKGEVCLAGSRLFLHQSIQDEFLAKFKTALEG
IRQGDPLDMATQLGAQASKMQFDKVQSYLRLATEEGAEVLTGGSRSDAADLADGNFIKPTVFTNVNNSMRIAQEEIFGPV
TSVITWSDEDDMMKQANNTTYGLAGGVWTKDIARAHRIARKLETGTVWINRYYNLKANMPLGGYKQSGFGREFSHEVLNH
YTQTKSVVVNLQEGRTGMFDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-79 43
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 8e-85 43
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 8e-85 43
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 8e-85 43
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-84 43
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-62 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Saro_3848 YP_001165619.1 aldehyde dehydrogenase (acceptor) VFG0082 Protein 9e-80 43