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Name : YPDSF_3736 (YPDSF_3736) Accession : YP_001165059.1 Strain : Yersinia pestis Pestoides F Genome accession: NC_009381 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 4295143 - 4297188 bp Length : 2046 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGTCTAATAATACAACGTCATTACCCGCTGAAAATTCGTCACACCCACGTAAAGGCACACCTATTCGTAAAAAGCAGCG CGAAGAGGCCCAACAGTTTATTAATACCTTACAAGGCGTTACTTTTCCCAACTCCCAACGTATTTATCTACAAGGCTCTC GGCCCGATATTCAAGTGCCGATGCGTGAAATCCAACTCAGCCCGACGCAAATCGGCGGCAGTAAAAACGAACCACGCTAT GAAGATAATGAGGCCATCCCGGTCTATGACACCTCCGGTCCCTATGGTGACCCACAAGCTAAACTGGATGTTCATAACGG GCTGCCTAAACTGCGTGCCGCTTGGGTCGCAGATCGCCAAGATACTGAAGCGCTGGCATCTGTCAGTTCCGGCTTTACCC AACAGCGTTTGGCTGATGAAGGCCTGGACCATTTACGTTTTGAGCATCTACCCCGCCCACGGAAAGCAGCCACTGGTCAA TGTGTGACTCAGTTGCATTACGCCCGACAGGGGAAAATCACGCCAGAGATGGAGTTTATCGCCCTACGGGAAAATATGGG CCGTGAACGTATTCGGGGTGAAGTCTTGCTTCAACAACATCCGGGACAAGCGTTTGGTGCCCATCTGCCGGAAAATATCA CCGCCGAGTTTGTGCGTCAGGAAGTGGCGGCCGGCCGAGCCATCATCCCCGCCAATATTAATCACCCAGAATCTGAACCA ATGATTATTGGCCGTAATTTTCTGGTCAAAGTGAATGCCAACATCGGTAATTCCGCCGTGACCTCTTCCATTGAAGAAGA GGTAGAAAAACTGGTCTGGTCTACCCGTTGGGGTGCCGATACGGTGATGGACTTATCTACGGGCCGCTATATTCATGAAA CGCGGGAATGGATCCTACGTAACAGCCCGGTCCCTATTGGCACGGTACCTATCTATCAGGCGCTGGAAAAAGTTAATGGC GTGGCCGAAAATCTGACCTGGGAAATGTTCCGTGACACCCTGTTAGAGCAGGCAGAGCAAGGGGTAGACTATTTTACTCT CCACGCGGGGGTCTTGTTGCGCTATGTGCCGATGACTGCCAAACGCCTAACCGGTATCGTCTCTCGCGGCGGTTCAATTA TGGCAAAATGGTGCCTTTCGCATCATCAGGAAAACTTCCTGTATCAGCATTTCCGCGAAATCTGTCAGATTTGTGCAGCC TATGACGTTTCATTATCACTGGGCGATGGCCTGCGCCCTGGCTCTATTCAAGATGCCAATGATGAGGCCCAATTCGCCGA ACTGCATACCTTGGGTGAATTGACCAAAATCGCCTGGGAGTATGATGTACAGGTGATGATCGAAGGCCCAGGGCATGTGC CGATGCAGATGATCCGCCGCAATATGACCGAGGAACTGGAACACTGCCACGAAGCGCCATTTTATACCTTAGGCCCACTG ACCACGGACATCGCACCGGGCTATGACCACTTTACCTCAGGGATTGGTGCAGCGATGATCGGCTGGTTCGGTTGCGCCAT GCTCTGTTATGTCACCCCCAAAGAGCACCTTGGTCTGCCGAATAAAGAGGATGTCAAACAGGGGCTTATTACTTACAAAA TTGCCGCGCACGCCGCAGATTTGGCTAAAGGCCACCCCGGTGCGCAAATTCGTGATAACGCCATGTCCAAAGCTCGCTTT GAGTTCCGCTGGGAAGATCAATTCAATTTGGCGCTTGATCCAGCAACAGCCCGCGCTTACCACGATGAAACCTTGCCGCA AGAGTCCGGGAAAGTCGCTCATTTTTGTTCCATGTGCGGCCCGAAATTCTGTTCAATGAAAATCTCACAAGAGGTCCGCG ATTATGCTGCGGCACAAGAACAAGCGGCCGCACAAGCACAAGCCGCTACACCAACCACCGCAGCACAACCAATAGACATC ACGCAGCCAATTAATATGCTGCAATCAGGGATGGAAAAAATGTCGGCCGAGTTTCGCTCCCGTGGCAGTGAGCTATACCA CCGCCCGGCGAATCTGAGTGCGGAGGCCAATAATGAGCCAACTTGA Protein sequence : MSNNTTSLPAENSSHPRKGTPIRKKQREEAQQFINTLQGVTFPNSQRIYLQGSRPDIQVPMREIQLSPTQIGGSKNEPRY EDNEAIPVYDTSGPYGDPQAKLDVHNGLPKLRAAWVADRQDTEALASVSSGFTQQRLADEGLDHLRFEHLPRPRKAATGQ CVTQLHYARQGKITPEMEFIALRENMGRERIRGEVLLQQHPGQAFGAHLPENITAEFVRQEVAAGRAIIPANINHPESEP MIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNG VAENLTWEMFRDTLLEQAEQGVDYFTLHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICQICAA YDVSLSLGDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPL TTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARF EFRWEDQFNLALDPATARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAAQEQAAAQAQAATPTTAAQPIDI TQPINMLQSGMEKMSAEFRSRGSELYHRPANLSAEANNEPT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 72 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 67 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 67 |
